RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CMAHPQ9Y471 501 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HES2Q9Y543 173 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PMS2P1A4D2B8 440 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 K7EQS6 105 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GPR39O43194 453 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GMDSO60547 372 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GBAP04062 536 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CD14P08571 375 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CNR1P21554 472 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PRKACBP22694 351 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ADRA1BP35368 520 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FHITP49789 147 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ATAD3CQ5T2N8 411 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ANKRD46Q86W74 232 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GLIS3Q8NEA6 775 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR7G3Q8NG95 312 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR52E4Q8NGH9 312 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR10T2Q8NGX3 314 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FNDC9Q8TBE3 224 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LRRN4Q8WUT4 740 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC25A43Q8WUT9 341 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 EDARADDQ8WWZ3 215 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RAB24Q969Q5 203 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MRPS24Q96EL2 167 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NSUN5Q96P11 429 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RBM14Q96PK6 669 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RBFOX1Q9NWB1 397 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM248Q9NWD8 314 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 POMT2Q9UKY4 750 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC7A7Q9UM01 511 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FAM74A7A6NL05 159 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SYT5O00445 386 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SSTR2P30874 369 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DEFA5Q01523 94 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CHRFAM7AQ494W8 412 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FAM74A3Q4VXF1 159 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 EMC4Q5J8M3 183 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 UNQ6494/PRO21346Q6UXR6 183 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NAA40Q86UY6 237 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CPNE8Q86YQ8 564 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF101Q8IZC7 436 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF611Q8N823 705 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 STXBP6Q8NFX7 210 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CPA5Q8WXQ8 436 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RAB3CQ96E17 227 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HMCESQ96FZ2 354 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LRR1Q96L50 414 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 APOOQ9BUR5 198 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM231Q9H6L2 316 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RANGRFQ9HD47 186 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ERVK-5Q9HDB9 667 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC6A20Q9NP91 592 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FBXW11Q9UKB1 542 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MROH6A6NGR9 719 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ANHXE9PGG2 379 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NPIPA5E9PKD4 350 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 H7BYZ3 331 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DOK2O60496 412 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR7A10O76100 309 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CBR1P16152 277 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 EPORP19235 508 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ELK1P19419 428 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HLA-DMAP28067 261 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RPS23P62266 143 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RPL38P63173 70 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CRADDP78560 199 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MFGE8Q08431 387 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GALNT2Q10471 571 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HTR4Q13639 388 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SEZ6Q53EL9 994 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TLDC1Q6P9B6 456 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SEZ6L2Q6UXD5 910 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RNF165Q6ZSG1 346 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PTRH1Q86Y79 214 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GCNT2Q8N0V5 402 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DTWD1Q8N5C7 304 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ARFGAP1Q8N6T3 406 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TCTEX1D1Q8N7M0 179 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SCCPDHQ8NBX0 429 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TWIST2Q8WVJ9 160 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM18Q96B42 140 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ELP4Q96EB1 424 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TAAR9Q96RI9 348 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PCYT2Q99447 389 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CACNG6Q9BXT2 260 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RAB1BQ9H0U4 201 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CUTCQ9NTM9 273 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HAO2Q9NYQ3 351 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 KCNS2Q9ULS6 477 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NPIPA1Q9UND3 350 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ARRDC5A6NEK1 342 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 HMX3A6NHT5 357 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 UPK3BL1B0FP48 263 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 UPK3BL2E5RIL1 263 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NUPL2O15504 423 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SIGLEC6O43699 453 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR8U9P0C7N5 309 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ACP5P13686 325 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NDUFB7P17568 137 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FDXRP22570 491 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms