RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PSMA6P60900 246 aaKnown RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 INSM1Q01101 510 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 SRSF4Q08170 494 aaKnown RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF750Q32MQ0 723 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 POM121L1PQ3SYA9 428 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 MS4A13Q5J8X5 152 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 FAM69AQ5T7M9 428 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 AADACL4Q5VUY2 407 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 ETV3LQ6ZN32 361 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 C6orf120Q7Z4R8 191 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 RBM45Q8IUH3 476 aaKnown RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 SLITRK4Q8IW52 837 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 UBALD2Q8IYN6 164 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 CMTM8Q8IZV2 173 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 MORN4Q8NDC4 146 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 NFKBIDQ8NI38 313 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 SPRYD4Q8WW59 207 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 MRPS31Q92665 395 aaKnown RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 GCDHQ92947 438 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 EBPLQ9BY08 206 aa5.15□□□□□ -1.59
CSDE1-202ENST00000339438 SPRTNQ9H040 489 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 MTIF3Q9H2K0 278 aaKnown RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF629Q9UEG4 869 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 EXOSC1Q9Y3B2 195 aaKnown RBP5.15□□□□□ -1.59
CSDE1-202ENST00000339438 F5H5T6 163 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 GAPDHSO14556 408 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SCAMP2O15127 329 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 MID1O15344 667 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF749O43361 778 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PRMT3O60678 531 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 EPPINO95925 133 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ASGR2P07307 311 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF35P13682 527 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ATF1P18846 271 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 HLA-DPA1P20036 260 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 IGFBP4P22692 258 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 MMP11P24347 488 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 MTNR1AP48039 350 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RENBPP51606 427 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PGDP52209 483 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 OC90Q02509 493 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SKP2Q13309 424 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 KLHL26Q53HC5 615 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ALKBH2Q6NS38 261 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 H3F3CQ6NXT2 135 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM71Q6P5X7 295 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF322Q6U7Q0 402 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 FAM122BQ7Z309 247 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 REC114Q7Z4M0 266 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 TMPRSS11BQ86T26 416 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 WDSUB1Q8N9V3 476 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 BOLLQ8N9W6 283 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SLC39A7Q92504 469 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PGLYRP3Q96LB9 341 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PFDN5Q99471 154 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 GFI1Q99684 422 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 WRAP53Q9BUR4 548 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ZYG11BQ9C0D3 744 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 BRD9Q9H8M2 597 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 A4GNTQ9UNA3 340 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CAMK2AQ9UQM7 478 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 NCKAP5O14513 1909 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ANKRD20A5PA0PJZ0 165 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 H7C0S8 307 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CACNB4O00305 520 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 STX11O75558 287 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RGS9O75916 674 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 NDUFB6O95139 128 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 GUCA1CO95843 209 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 FAM157CP0CG43 387 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 UBBP0CG47 229 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 UBCP0CG48 685 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CDH4P55283 916 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RPS27AP62979 156 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 UBA52P62987 128 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 HBA1P69905 142 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 BDH1Q02338 343 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SCARB2Q14108 478 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 TEAD2Q15562 447 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 C21orf62-AS1Q17RA5 79 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PLEKHN1Q494U1 663 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 C4orf46Q504U0 113 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RNASE12Q5GAN4 147 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ENTPD8Q5MY95 495 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 C18orf63Q68DL7 685 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 KIAA1161Q6NSJ0 714 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 FAM199XQ6PEV8 388 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 STX12Q86Y82 276 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 APCDD1Q8J025 514 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 C15orf54Q8N8G6 183 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 HMGB4Q8WW32 186 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 OSTF1Q92882 214 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ECHDC3Q96DC8 303 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PHYHIPLQ96FC7 376 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 MEGF10Q96KG7 1140 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 TAAR9Q96RI9 348 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 C19orf43Q9BQ61 176 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 WNT5BQ9H1J7 359 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SLC38A1Q9H2H9 487 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 NOX3Q9HBY0 568 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms