RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TSSK4Q6SA08 328 aa14.96□□□□□ -0.01
NPHP3-201ENST00000337331 DPPA4Q7L190 304 aa14.96□□□□□ -0.01
NPHP3-201ENST00000337331 ZNF584Q8IVC4 421 aa14.96□□□□□ -0.01
NPHP3-201ENST00000337331 STK35Q8TDR2 534 aa14.96□□□□□ -0.01
NPHP3-201ENST00000337331 GPR174Q9BXC1 333 aa14.96□□□□□ -0.01
NPHP3-201ENST00000337331 PTGES2Q9H7Z7 377 aa14.96□□□□□ -0.01
NPHP3-201ENST00000337331 SFXN1Q9H9B4 322 aa14.96□□□□□ -0.01
NPHP3-201ENST00000337331 MEIKINA0A087WXM9 373 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 C1orf105O95561 183 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 KLK3P07288 261 aaPredicted RBP14.96□□□□□ -0.02
NPHP3-201ENST00000337331 POU3F2P20265 443 aaPredicted RBP14.96□□□□□ -0.02
NPHP3-201ENST00000337331 PLCXD2Q0VAA5 305 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 C3orf38Q5JPI3 329 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 SFXN4Q6P4A7 337 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 USP53Q70EK8 1073 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF283Q8N7M2 679 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 LINC01599Q8WXQ3 324 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 CHRDQ9H2X0 955 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 TMEM30AQ9NV96 361 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 DHDHQ9UQ10 334 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 A0A1B0GUL6 1792 aa14.96□□□□□ -0.02
NPHP3-201ENST00000337331 PSMB5P28074 263 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF41P51814 821 aaPredicted RBP14.95□□□□□ -0.02
NPHP3-201ENST00000337331 CTXN1P60606 82 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 HLXQ14774 488 aaPredicted RBP14.95□□□□□ -0.02
NPHP3-201ENST00000337331 HYAL4Q2M3T9 481 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 PCGF3Q3KNV8 242 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 PODNL1Q6PEZ8 512 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 CDH26Q8IXH8 852 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ACBD4Q8NC06 268 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 MS4A4EQ96PG1 132 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF700Q9H0M5 742 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 DDX31Q9H8H2 851 aaKnown RBP14.95□□□□□ -0.02
NPHP3-201ENST00000337331 MEIS3P1A6NDR6 274 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 MPC2O95563 127 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 GKN3PP0CG01 181 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 LIPCP11150 499 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 CPT2P23786 658 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ITGB7P26010 798 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 AKR1C3P42330 323 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 CSNK1DP48730 415 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 SGSHP51688 502 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 HCCSP53701 268 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ZC3H14Q6PJT7 736 aaKnown RBP14.95□□□□□ -0.02
NPHP3-201ENST00000337331 MSRB3Q8IXL7 192 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 CDRT4Q8N9R6 151 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF740Q8NDX6 193 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 BADQ92934 168 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 TRMT2BQ96GJ1 504 aaKnown RBP14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ZFYVE21Q9BQ24 234 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 SMCO4Q9NRQ5 59 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 APOBEC3BQ9UH17 382 aaKnown RBP14.95□□□□□ -0.02
NPHP3-201ENST00000337331 NPIPA5A0A0B4J1W7 369 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 TCRBV21S2A2A0A5A6 115 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 NPIPA7E9PJI5 369 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 UBL3O95164 117 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 NDUFB2O95178 105 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 NPIPA8P0DM63 369 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 CSF2RBP32927 897 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 SLC1A3P43003 542 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 VAMP2P63027 116 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 SNTB1Q13884 538 aaKnown RBP14.95□□□□□ -0.02
NPHP3-201ENST00000337331 TP53I3Q53FA7 332 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 ACSM3Q53FZ2 586 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 OR52H1Q8NGJ2 320 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 PIGQQ9BRB3 760 aa14.95□□□□□ -0.02
NPHP3-201ENST00000337331 CASC3O15234 703 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 EIF4EP06730 217 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 PTBP1P26599 531 aaKnown RBP eCLIP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SLC6A1P30531 599 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SELENOPP49908 381 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SLC14A1Q13336 389 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ELOCQ15369 112 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 HEPHL1Q6MZM0 1159 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 LEG1Q6P5S2 330 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 DAZLQ92904 295 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 PRRC1Q96M27 445 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF649Q9BS31 505 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 IL23AQ9NPF7 189 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 A0A0B4J203 849 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 H7C1Q1 480 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF593O00488 134 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 PLGP00747 810 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 GIPP09681 153 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 C1SP09871 688 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 FBXO45P0C2W1 286 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ARAFP10398 606 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ACP2P11117 423 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 NME1P15531 152 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 PRLHRP49683 370 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 CAMK2DQ13557 499 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 TDGQ13569 410 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 RHEBQ15382 184 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 C14orf28Q4W4Y0 310 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 PDZD11Q5EBL8 140 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 HACD4Q5VWC8 232 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 FIP1L1Q6UN15 594 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 HORMAD2Q8N7B1 307 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SLC6A7Q99884 636 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms