RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HLA-DPB1P04440 258 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 POU3F3P20264 500 aaPredicted RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 KIR2DL3P43628 341 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 FGFBP1Q14512 234 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.1□□□□□ -1.11
SNCA-201ENST00000336904 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 LEG1Q6P5S2 330 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 TMPRSS11FQ6ZWK6 438 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 GKN2Q86XP6 184 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 SLC35F3Q8IY50 421 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 ZNF615Q8N8J6 731 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 ZSCAN1Q8NBB4 408 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 TMEM131Q92545 1883 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 C3orf49Q96BT1 292 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 SGTBQ96EQ0 304 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 PHF7Q9BWX1 381 aaPredicted RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 HDHD2Q9H0R4 259 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 CPNE5Q9HCH3 593 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 PLSCR3Q9NRY6 295 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 MRPS18AQ9NVS2 196 aaKnown RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 SLC35A3Q9Y2D2 325 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 A3GALT2U3KPV4 340 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 IGKV1D-42A0A075B6H8 117 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 TRDV1A0A1B0GX56 115 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ISPDA4D126 451 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 FAM221BA6H8Z2 402 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ELOA3DA6NLF2 546 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 J3QRE1 110 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 TFPIP10646 304 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 HK1P19367 917 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 CD27P26842 260 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 GABRA4P48169 554 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 SOX2P48431 317 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ATP12AP54707 1039 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ELOA3BQ3SY89 546 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 SERPINA12Q8IW75 414 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 RDH10Q8IZV5 341 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 ELOA3Q8NG57 546 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 SNX33Q8WV41 574 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ZFP3Q96NJ6 502 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 DPYSL5Q9BPU6 564 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 NDC1Q9BTX1 674 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 NUDT9Q9BW91 350 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 TSPAN10Q9H1Z9 355 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 ERVMER34-1Q9H9K5 563 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 BEX1Q9HBH7 125 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 MKKSQ9NPJ1 570 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 PLCL2Q9UPR0 1127 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 KLHDC2Q9Y2U9 406 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 GPR179Q6PRD1 2367 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ZNF749O43361 778 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 RGS9O75916 674 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 NSA2O95478 260 aaKnown RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 AHCYP23526 432 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 SLC6A6P31641 620 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ETV6P41212 452 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 CDKN2AP42771 156 aaKnown RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 GALEQ14376 348 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ACSM3Q53FZ2 586 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 TRIQKQ629K1 86 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 BICRALQ6AI39 1079 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ZNF613Q6PF04 617 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ULK3Q6PHR2 472 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 LRRC69Q6ZNQ3 347 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 GDPGP1Q6ZNW5 385 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 RTL4Q6ZR62 310 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 LINC00299Q6ZSB3 139 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 KRT74Q7RTS7 529 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 PRSS45Q7RTY3 260 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 GID4Q8IVV7 300 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 SLC25A45Q8N413 288 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 OR4M1Q8NGD0 313 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 SLC2A12Q8TD20 617 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 DNAJA4Q8WW22 397 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 LMF2Q9BU23 707 aaKnown RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 ULBP3Q9BZM4 244 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 OR11A1Q9GZK7 315 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 DUSP15Q9H1R2 295 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 TRIM36Q9NQ86 728 aa8.09□□□□□ -1.11
SNCA-201ENST00000336904 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.09□□□□□ -1.11
SNCA-201ENST00000336904 CPNE3O75131 537 aaKnown RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 UTS2O95399 124 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TIAF1O95411 115 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 ADRB1P08588 477 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 OR8G3PP0DMU2 310 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 FASLGP48023 281 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SLC37A1P57057 533 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 RACK1P63244 317 aaKnown RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 LTBQ06643 244 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 CDC20Q12834 499 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TBRG1Q3YBR2 411 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 ATAD3CQ5T2N8 411 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 COL13A1Q5TAT6 717 aaPredicted RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 ABHD4Q8TB40 342 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 PELI1Q96FA3 418 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 DERL3Q96Q80 235 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 GAL3ST1Q99999 423 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TWSG1Q9GZX9 223 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms