RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 GRINAQ7Z429 371 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CALHM3Q86XJ0 350 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 GPD1LQ8N335 351 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 OR9A4Q8NGU2 314 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CD300LFQ8TDQ1 290 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 THEM6Q8WUY1 208 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SLC35F5Q8WV83 523 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 ZNF48Q96MX3 618 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 OR52A1Q9UKL2 312 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 RICTORQ6R327 1708 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SIPA1L3O60292 1781 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 KDM4FA0A1W2PPD8 638 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 F5H0A9 414 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 HAS3O00219 553 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 TXNDC12O95881 172 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 GZMBP10144 247 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 PSMB4P28070 264 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SLC37A1P57057 533 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SRSF3P84103 164 aaKnown RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 UBE2V2Q15819 145 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 ZNF674Q2M3X9 581 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SLC27A1Q6PCB7 646 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 DRAM2Q6UX65 266 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CCDC117Q8IWD4 279 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 RCC1LQ96I51 464 aaKnown RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 ABHD1Q96SE0 405 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CWH43Q9H720 699 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 COMMD9Q9P000 198 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SNX11Q9Y5W9 270 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 UBIAD1Q9Y5Z9 338 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 F5H423 210 aaPredicted RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 UROSP10746 265 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 S100A7P31151 101 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 MECP2P51608 486 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 PRKAG1P54619 331 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SELENOVP59797 346 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 CNN3Q15417 329 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 RAB11BQ15907 218 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 MFSD14BQ5SR56 506 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SFRP4Q6FHJ7 346 aaPredicted RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 OR2L2Q8NH16 312 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 CPT1CQ8TCG5 803 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 NUDCD2Q8WVJ2 157 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SAT2Q96F10 170 aaPredicted RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 MRGPRX1Q96LB2 322 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 PEBP4Q96S96 227 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 ARHGAP9Q9BRR9 750 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 UTP23Q9BRU9 249 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 POLR3FQ9H1D9 316 aaPredicted RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 SOHLH2Q9NX45 425 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 KLHL8Q9P2G9 620 aaPredicted RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 KCNG2Q9UJ96 466 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 ZNF346Q9UL40 294 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 PADI1Q9ULC6 663 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 FLVCR2Q9UPI3 526 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SF3B6Q9Y3B4 125 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 NUP188Q5SRE5 1749 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 C2orf78A6NCI8 922 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 IDSB3KWA1 339 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 C22orf46C9J442 243 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 CTDSPLO15194 276 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 ADAP1O75689 374 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 VNN2O95498 520 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 MT-ND5P03915 603 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SOD3P08294 240 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 LAMP1P11279 417 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 BRS3P32247 399 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 FABP5Q01469 135 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 PPIGQ13427 754 aaKnown RBP eCLIP7.98□□□□□ -1.13
TDP1-201ENST00000335725 ENPP2Q13822 863 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 ARL6IP1Q15041 203 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 IQCJQ1A5X6 159 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SDHAF4Q5VUM1 108 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 KIAA1211LQ6NV74 962 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 PAQR3Q6TCH7 311 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 PRSS57Q6UWY2 283 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 TMEM108Q6UXF1 575 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 ACOT7LQ6ZUV0 252 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SLC35D2Q76EJ3 337 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 OR2AK2Q8NG84 335 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 ORAOV1Q8WV07 137 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 APOBEC3GQ9HC16 384 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 FNDC3AQ9Y2H6 1198 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 YLPM1P49750 1951 aaKnown RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 DOT1LQ8TEK3 1739 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 UBR2Q8IWV8 1755 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 A0A0G2JN53 185 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 C5orf51A6NDU8 294 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 E7EQ34 232 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 GOSR2O14653 212 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 B4GALT5O43286 388 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 WNT1P04628 370 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 PCCBP05166 539 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 F7P08709 466 aaPredicted RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 IL6RP08887 468 aaPredicted RBP7.98□□□□□ -1.13
TDP1-201ENST00000335725 AKR1C3P42330 323 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SLC11A1P49279 550 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 SULT1A1P50225 295 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 HYAL4Q2M3T9 481 aa7.98□□□□□ -1.13
TDP1-201ENST00000335725 C6orf136Q5SQH8 315 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms