RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 DPH1Q9BZG8 443 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 KIF25Q9UIL4 384 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 ZNF443Q9Y2A4 671 aaPredicted RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 HEBP2Q9Y5Z4 205 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 H7C2Y5 167 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 SOCS6O14544 535 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 GNB5O14775 395 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 B3GALT2O43825 422 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 ANKRD34CP0C6C1 535 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 RD3LP0DJH9 198 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 CBR1P16152 277 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 RAB3BP20337 219 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 ST3GAL3Q11203 375 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 IKZF1Q13422 519 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 NNATQ16517 81 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 OCLNQ16625 522 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 ZNF613Q6PF04 617 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 WDR88Q6ZMY6 472 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 ZAR1Q86SH2 424 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 DEFB119Q8N690 84 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 MRPL38Q96DV4 380 aaKnown RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 PELOQ9BRX2 385 aaKnown RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 C20orf141Q9NUB4 165 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 HRASLS2Q9NWW9 162 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 KLHL28Q9NXS3 571 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 TESQ9UGI8 421 aaKnown RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 KCNE5Q9UJ90 142 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 SCP2D1Q9UJQ7 156 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 MRTO4Q9UKD2 239 aaKnown RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 ADAM11O75078 769 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 CT62P0C5K7 136 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 KCNJ3P48549 501 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 FNTBP49356 437 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 CDH11P55287 796 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 MEDAGQ5VYS4 303 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 PIGXQ8TBF5 258 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 GCDHQ92947 438 aaPredicted RBP12.8□□□□□ -0.36
SF1-202ENST00000334944 SCARF2Q96GP6 870 aaPredicted RBP12.8□□□□□ -0.36
SF1-202ENST00000334944 MS4A4EQ96PG1 132 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 SLC38A3Q99624 504 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 ARHGDIGQ99819 225 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 DPYSL5Q9BPU6 564 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 A0A0B4J203 849 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 GXYLT2A0PJZ3 443 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 TFP02787 698 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 H2AFB2P0C5Z0 115 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 CPMP14384 443 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 HNRNPA2B1P22626 353 aaKnown RBP12.8□□□□□ -0.36
SF1-202ENST00000334944 GAS1P54826 345 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 WNT4P56705 351 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 OR10A3P58181 314 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 RBMS2Q15434 407 aaKnown RBP12.8□□□□□ -0.36
SF1-202ENST00000334944 GSG1Q2KHT4 349 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 DGAT2L6Q6ZPD8 337 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 IZUMO1Q8IYV9 350 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 SLC22A18ASQ8N1D0 253 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 GRHL3Q8TE85 626 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 MRPS24Q96EL2 167 aaKnown RBP12.8□□□□□ -0.36
SF1-202ENST00000334944 SDF2Q99470 211 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 CMSS1Q9BQ75 279 aaKnown RBP12.8□□□□□ -0.36
SF1-202ENST00000334944 ARPC5O15511 151 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 SGCEO43556 437 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 SULT1A3P0DMM9 295 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 SULT1A4P0DMN0 295 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 AHCYP23526 432 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 AKR1C2P52895 323 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 SLC16A1P53985 500 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 DGCR2P98153 550 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 AKR1C1Q04828 323 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 TSPAN31Q12999 210 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 FAM198BQ6UWH4 519 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 FAM160A2Q8N612 972 aaPredicted RBP12.8□□□□□ -0.36
SF1-202ENST00000334944 GNPDA2Q8TDQ7 276 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 HGDQ93099 445 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 OR2M2Q96R28 347 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 S1PR5Q9H228 398 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 CA10Q9NS85 328 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 PCOLCE2Q9UKZ9 415 aa12.8□□□□□ -0.36
SF1-202ENST00000334944 ZNF593O00488 134 aaPredicted RBP12.79□□□□□ -0.36
SF1-202ENST00000334944 GABRPO00591 440 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 SSX5O60225 188 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 APOC1P02654 83 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 LIMS3P0CW19 117 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 LIMS4P0CW20 117 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 MRPL2Q5T653 305 aaKnown RBP12.79□□□□□ -0.36
SF1-202ENST00000334944 VASNQ6EMK4 673 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 OR5M10Q6IEU7 315 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 SLC36A4Q6YBV0 504 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 Q6ZS52 159 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 CPOQ8IVL8 374 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 CCDC36Q8IYA8 594 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 METTL27Q8N6F8 245 aaPredicted RBP12.79□□□□□ -0.36
SF1-202ENST00000334944 FGF11Q92914 225 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 RERGQ96A58 199 aaPredicted RBP12.79□□□□□ -0.36
SF1-202ENST00000334944 TTTY10Q9BZA0 68 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 FAM60AQ9NP50 221 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 C2orf42Q9NWW7 574 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms