RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SLC23A2Q9UGH3 650 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PCDHGA1Q9Y5H4 931 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 ARL2-SNX15V9GYD0 113 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 UBL3O95164 117 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PMP2P02689 132 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MTNR1BP49286 362 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PSMB3P49720 205 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MLF1P58340 268 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PRAMEF8Q5VWM4 474 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PRAMEF7Q5VXH5 474 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 OR8U1Q8NH10 309 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 DDOQ99489 341 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 NTMT1Q9BV86 223 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 V9GYS6 101 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 BCL9LQ86UU0 1499 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 TRBV4-1A0A0J9YWV2 114 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 GABRR3A8MPY1 467 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 SEC14L6B5MCN3 397 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 DCTN6O00399 190 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 LMAN2Q12907 356 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 GPR18Q14330 331 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM31Q5JXX7 168 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 KCTD11Q693B1 232 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 UMODL1-AS1Q8N2C9 162 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 OR5M11Q96RB7 305 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PLIN4Q96Q06 1357 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 VIRMAQ69YN4 1812 aaKnown RBP9.17□□□□□ -0.94
COL4A6-201ENST00000334504 FAM221BA6H8Z2 402 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 GABARAPO95166 117 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 RAB11AP62491 216 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 RNF212Q495C1 297 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 RNLSQ5VYX0 342 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 PNPLA1Q8N8W4 532 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TSSK2Q96PF2 358 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 C11orf84Q9BUA3 381 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SPACA1Q9HBV2 294 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 WIF1Q9Y5W5 379 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 KIDINS220Q9ULH0 1771 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TRIM77I1YAP6 450 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CCSO14618 274 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 NME2P1O60361 137 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF623O75123 536 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SRYQ05066 204 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 AADACL3Q5VUY0 350 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 DPPA4Q7L190 304 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 VRK2Q86Y07 508 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 OR4C5Q8NGB2 326 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 OR9A4Q8NGU2 314 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SLC41A2Q96JW4 573 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SLC12A9Q9BXP2 914 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SLC6A20Q9NP91 592 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SLAMF8Q9P0V8 285 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 COCHO43405 550 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TRAPPC2P0DI81 140 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TRAPPC2BP0DI82 140 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SMIM18P0DKX4 95 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CPOXP36551 454 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 POLR2IP36954 125 aaKnown RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 UBE2NP61088 152 aaKnown RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 EEF1A1P68104 462 aaKnown RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 FOXK1P85037 733 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 MOB3CQ70IA8 216 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 MDGA2Q7Z553 956 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 OR1S2Q8NGQ3 325 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 AKR7LQ8NHP1 331 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 PELI2Q9HAT8 420 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 PPLO60437 1756 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM72A0PK05 275 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 UMAD1C9J7I0 102 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF587BE7ETH6 402 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 PPP5D1E7EU14 171 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 MPEG1Q2M385 716 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 GLYR1Q49A26 553 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM182Q6ZP80 229 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 GPRIN1Q7Z2K8 1008 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CCDC74AQ96AQ1 378 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SGPP1Q9BX95 441 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 STRADBQ9C0K7 418 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 OCEL1Q9H607 264 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 NOX4Q9NPH5 578 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 DMRT3Q9NQL9 472 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 KCNIP2Q9NS61 270 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 GMPR2Q9P2T1 348 aaKnown RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF443Q9Y2A4 671 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ACTL7AQ9Y615 435 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 H3BML4 177 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 BET1O15155 118 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 VEGFDO43915 354 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 PMS2P2O95744 297 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 IL1RNP18510 177 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CD68P34810 354 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 GRB2P62993 217 aaKnown RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SLC7A9P82251 487 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 AANATQ16613 207 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ARHGAP11BQ3KRB8 267 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CCNJQ5T5M9 372 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms