RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 POLDIP3Q9BY77 421 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 MED9Q9NWA0 146 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ANKRD10Q9NXR5 420 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 C19orf25Q9UFG5 118 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ARFGEF3Q5TH69 2177 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CASP8AP2Q9UKL3 1982 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 KDM6AO15550 1401 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 J3QRK9 145 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PRKAB2O43741 272 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 NME2P1O60361 137 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 RHBDL1O75783 438 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TPOP07202 933 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ADPRHP54922 357 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 HERVK_113P61574 105 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ID2Q02363 134 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PLEKHS1Q5SXH7 462 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 BRICD5Q6PL45 260 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR6V1Q8N148 313 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4C15Q8NGM1 316 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TCP10LQ8TDR4 215 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 METTL21AQ8WXB1 218 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMED3Q9Y3Q3 217 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ELOVL7A1L3X0 281 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 YDJCA8MPS7 323 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CD74P04233 296 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ANKRD34CP0C6C1 535 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SOX2P48431 317 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 UBE2L3P68036 154 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CDC42EP1Q00587 391 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ST3GAL3Q11203 375 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 BCL2L15Q5TBC7 163 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 IRAK1BP1Q5VVH5 260 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM217Q8N7C4 229 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 FAM98AQ8NCA5 519 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4A16Q8NH70 328 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SARGQ9BW04 601 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACOT13Q9NPJ3 140 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PPM1HQ9ULR3 514 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 NDRG2Q9UN36 371 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4C46A6NHA9 309 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 AQP7P3A6NL99 342 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM253P0C7T8 217 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 HKR1P10072 659 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ALAS1P13196 640 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CRHR1P34998 444 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 EFNA5P52803 228 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TAS2R38P59533 333 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR8G1Q15617 311 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 FLYWCH1Q4VC44 716 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CD300LGQ6UXG3 332 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC24A5Q71RS6 500 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC16A14Q7RTX9 510 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRGPRDQ8TDS7 321 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SYT17Q9BSW7 474 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ALKBH7Q9BT30 221 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR51I2Q9H344 312 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 MYOZ2Q9NPC6 264 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 KANSL3Q9P2N6 904 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CELF2O95319 508 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 KHKP50053 298 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 GAB1Q13480 694 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ARSJQ5FYB0 599 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF611Q8N823 705 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ARRDC4Q8NCT1 418 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SHKBP1Q8TBC3 707 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SDR42E1Q8WUS8 393 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CELF1Q92879 486 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 LGALS12Q96DT0 336 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TVP23CQ96ET8 276 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ARHGAP9Q9BRR9 750 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 MROQ9BYG7 248 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPR83Q9NYM4 423 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CNTN6Q9UQ52 1028 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 A0A1B0GTI1 187 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 LOC100130705A0A1B0GUX0 176 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 HS3ST1O14792 307 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 NCK2O43639 380 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TLX3O43711 291 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PCDH7O60245 1069 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PTHLHP12272 177 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ALAS2P22557 587 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PAFAH1B2P68402 229 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPR17Q13304 367 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPM6BQ13491 265 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CAMK2GQ13555 558 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 FKBP1CQ5VVH2 108 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 KIAA1614Q5VZ46 1190 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SULF2Q8IWU5 870 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 RNF113BQ8IZP6 322 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 LILRB2Q8N423 598 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 KRTCAP2Q8N6L1 136 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PRMT6Q96LA8 375 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SEMA3CQ99985 751 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 PAAF1Q9BRP4 392 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 FOXJ2Q9P0K8 574 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 HSF4Q9ULV5 492 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CACNG2Q9Y698 323 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CXCL11O14625 94 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 RRP8O43159 456 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MT-CYBP00156 380 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms