RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 H0YIG0 161 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 GPX5O75715 221 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 ARSBP15848 533 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PNLIPP16233 465 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 GPX2P18283 190 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 RPS5P46782 204 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 HYAL4Q2M3T9 481 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF425Q6IV72 752 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 FIGNL1Q6PIW4 674 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PAPD4Q6PIY7 484 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 LINC00299Q6ZSB3 139 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 SLC16A12Q6ZSM3 486 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 UBQLNLQ8IYU4 475 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 OR4K17Q8NGC6 315 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 G6PC3Q9BUM1 346 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PRDM9Q9NQV7 894 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 SDHAF3Q9NRP4 125 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 ACSS1Q9NUB1 689 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PCDHGB7Q9Y5F8 929 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PRKYO43930 277 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 TMPRSS11DO60235 418 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 RGS9O75916 674 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 ALX3O95076 343 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 FURINP09958 794 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 HSD17B7P56937 341 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PLGLB1Q02325 96 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 CLPPQ16740 277 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 HES5Q5TA89 166 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 CDRT4Q8N9R6 151 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 OR1L3Q8NH93 324 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PPP1R14AQ96A00 147 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 NXPE2Q96DL1 559 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 CHST8Q9H2A9 424 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 TMEM185BQ9H7F4 350 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 RRP8O43159 456 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 CREBL2O60519 120 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 SPDEFO95238 335 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 WISP3O95389 354 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 TFP02787 698 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 HMGN2P05204 90 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 GYPBP06028 91 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 EXOSC7Q15024 291 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 FCN2Q15485 313 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 C1QTNF12Q5T7M4 302 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 NXNL2Q5VZ03 156 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 FCRL6Q6DN72 434 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 SLC48A1Q6P1K1 146 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 KCTD9Q7L273 389 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 JAGN1Q8N5M9 183 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 DOK1Q99704 481 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 ACTRT3Q9BYD9 372 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 UPB1Q9UBR1 384 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 CACNG2Q9Y698 323 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 DENND4CQ5VZ89 1909 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 RP1P56715 2156 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 IDSB3KWA1 339 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 DISC1C4P0D8 188 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 SCG5P05408 212 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 MAOAP21397 527 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 MAP3K8P41279 467 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 COL4A4P53420 1690 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-201ENST00000334136 PUM1Q14671 1186 aaKnown RBP eCLIP10.9□□□□□ -0.66
HDAC6-201ENST00000334136 DUSP7Q16829 419 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 RFPL4BQ6ZWI9 263 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 TMPRSS12Q86WS5 348 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 MS4A4EQ96PG1 132 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 TSNAXQ99598 290 aaKnown RBP10.9□□□□□ -0.66
HDAC6-201ENST00000334136 ALG8Q9BVK2 526 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 PRR14Q9BWN1 585 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 QRSL1Q9H0R6 528 aaKnown RBP10.9□□□□□ -0.66
HDAC6-201ENST00000334136 TMEFF2Q9UIK5 374 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-201ENST00000334136 A0A0X1KG70 313 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 A0A1W2PR48 441 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF670-ZNF695F2Z2N8 137 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 ALOX12BO75342 701 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 RBBP9O75884 186 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 STK17BO94768 372 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 KCNK2O95069 426 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 MT-ND4P03905 459 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF883P0CG24 379 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 RRAS2P62070 204 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-201ENST00000334136 GFOD2Q3B7J2 385 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 PXDC1Q5TGL8 231 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 FAM71E1Q6IPT2 247 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 FAM111BQ6SJ93 734 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 GID4Q8IVV7 300 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 HORMAD2Q8N7B1 307 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 ACOT12Q8WYK0 555 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 SLC25A36Q96CQ1 311 aa10.9□□□□□ -0.66
HDAC6-201ENST00000334136 A0A1W2PPV9 198 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 AKR7A2O43488 359 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 SCO1O75880 301 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 ZFAND5O76080 213 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 GTF2F2P13984 249 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 GAB1Q13480 694 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 GALEQ14376 348 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 BAK1Q16611 211 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 FAM181AQ8N9Y4 354 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 NT5CQ8TCD5 201 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms