RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 DMKNQ6E0U4 476 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 ZNF544Q6NX49 715 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 OGFOD3Q6PK18 319 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 DPY19L2P2Q6ZN68 376 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 PRSS58Q8IYP2 241 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 SLC43A2Q8N370 569 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 NPEPL1Q8NDH3 523 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 FAM71CQ8NEG0 241 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 OR7G1Q8NGA0 311 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 PELOQ9BRX2 385 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 EPHA6Q9UF33 1036 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 ST6GALNAC2Q9UJ37 374 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 KLHL21Q9UJP4 597 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 RBMX2Q9Y388 322 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 EML5Q05BV3 1969 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 WDR87Q6ZQQ6 2873 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 A0A1W2PPK0 400 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 MEIOCA2RUB1 952 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 CDC14CA4D256 554 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 C17orf51A8MQB3 221 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 A8MV72 311 aaPredicted RBP13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 SELENOFO60613 162 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 UTS2O95399 124 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 MST1P26927 711 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 GALNSP34059 522 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 CFHR1Q03591 330 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 ACSM3Q53FZ2 586 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 GLCCI1Q86VQ1 547 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 C10orf53Q8N6V4 93 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 C19orf18Q8NEA5 215 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 CADM4Q8NFZ8 388 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 OR6K6Q8NGW6 343 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 C1orf216Q8TAB5 229 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 PELI1Q96FA3 418 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 MOGAT1Q96PD6 335 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 ADOQ96SZ5 270 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 HOXD1Q9GZZ0 328 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 NRIP3Q9NQ35 241 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 RASD1Q9Y272 281 aa13.58□□□□□ -0.23
CLCNKA-201ENST00000331433 A0A1B0GVC2 190 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 A6NIN4 97 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 FAM171A2A8MVW0 826 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 B4DXG7 233 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 SCDO00767 359 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 SC5DO75845 299 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 PIAS2O75928 621 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 IL33O95760 270 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 MYL9P24844 172 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 THBS2P35442 1172 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 AQP2P41181 271 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 ARL4DP49703 201 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 RPS4XP62701 263 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 PON3Q15166 354 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 WBP2NLQ6ICG8 309 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 SFXN4Q6P4A7 337 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 NCCRP1Q6ZVX7 275 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC35F2Q8IXU6 374 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 Q8N9G6 341 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF527Q8NB42 609 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 OR6F1Q8NGZ6 308 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 OR1L3Q8NH93 324 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 RTN4RQ9BZR6 473 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 NPAP1Q9NZP6 1156 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 EXTL2Q9UBQ6 330 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 COPS3Q9UNS2 423 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 NOX1Q9Y5S8 564 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 ARID1BQ8NFD5 2236 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 COL6A3P12111 3177 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 CEP192Q8TEP8 1941 aa13.58□□□□□ -0.24
CLCNKA-201ENST00000331433 A0A0G2JMP0 313 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 TEX13CA0A0J9YWL9 993 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 A0A0X1KG70 313 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 TTC36A6NLP5 189 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 PAHP00439 452 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 OR2T7P0C7T2 308 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 SPI1P17947 270 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 CD53P19397 219 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 POU3F3P20264 500 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 BCKDHBP21953 392 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 PPICP45877 212 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 NRG3P56975 720 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 HSD11B2P80365 405 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC25A35Q3KQZ1 300 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 VWA2Q5GFL6 755 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 METAP1DQ6UB28 335 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 PXKQ7Z7A4 578 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ATG4DQ86TL0 474 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF440Q8IYI8 595 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 OR4M2Q8NGB6 313 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 OR2T27Q8NH04 317 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ENKURQ8TC29 256 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 CHRNA10Q9GZZ6 450 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ENAMQ9NRM1 1142 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF346Q9UL40 294 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 FER1L5A0AVI2 2057 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 IGHV1OR21-1A0A087WYE8 117 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 A0A0G2JK05 382 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC19A2O60779 497 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms