RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ZG16BQ96DA0 208 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 SCMH1Q96GD3 660 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 CRELD1Q96HD1 420 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 FAM173AQ9BQD7 235 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 PTGES2Q9H7Z7 377 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 NMNAT1Q9HAN9 279 aaPredicted RBP8.65□□□□□ -1.02
C11orf54-201ENST00000331239 TMEM27Q9HBJ8 222 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 CNOT2Q9NZN8 540 aaKnown RBP8.65□□□□□ -1.02
C11orf54-201ENST00000331239 CCDC59Q9P031 241 aaKnown RBP8.65□□□□□ -1.02
C11orf54-201ENST00000331239 RHCGQ9UBD6 479 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 CHST2Q9Y4C5 530 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 CELSR3Q9NYQ7 3312 aa8.65□□□□□ -1.02
C11orf54-201ENST00000331239 TRAV17A0A0B4J275 112 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 FAM47E-STBD1D6RA91 191 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 MKRN2OSH3BPM6 223 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 KLRC4-KLRK1H3BQV0 150 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ADAM10O14672 748 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 SNPHO15079 494 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CDC40O60508 579 aaKnown RBP eCLIP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ADAP00813 363 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 PNMTP11086 282 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 DBTP11182 482 aaKnown RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 FUT4P22083 530 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CHMP24386 653 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 GRK5P34947 590 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CD96P40200 585 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 PTGDSP41222 190 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 RBM34P42696 430 aaKnown RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 COPZ1P61923 177 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ST3GAL3Q11203 375 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 NNATQ16517 81 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ARMCX4Q5H9R4 360 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 COLEC12Q5KU26 742 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 B3GNTL1Q67FW5 361 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 WBP2NLQ6ICG8 309 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ZNF770Q6IQ21 691 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 RPUSD3Q6P087 351 aaKnown RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 RNF113BQ8IZP6 322 aaKnown RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 OTUB1Q96FW1 271 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 C5orf34Q96MH7 638 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 SLC19A3Q9BZV2 496 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 C6orf62Q9GZU0 229 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 LRFN1Q9P244 771 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ICAM5Q9UMF0 924 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 BOKQ9UMX3 212 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 TAF4O00268 1085 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 NME2P1O60361 137 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ZNF354AO60765 605 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ATP6V1G1O75348 118 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 NME6O75414 186 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CBR3O75828 277 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 EPPINO95925 133 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 PRKAR1AP10644 381 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 NME2P22392 152 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ACAA2P42765 397 aaKnown RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 RGS6P49758 472 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ZNF136P52737 540 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CRISP1P54107 249 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 SLC25A25Q6KCM7 469 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ULK3Q6PHR2 472 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 IL20RBQ6UXL0 311 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 PTCHD4Q6ZW05 846 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CLIP4Q8N3C7 705 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ZADH2Q8N4Q0 377 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 SIRT6Q8N6T7 355 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 PSD4Q8NDX1 1056 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 OR10G3Q8NGC4 313 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 OR6S1Q8NH40 331 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 PHOSPHO1Q8TCT1 267 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 THAP3Q8WTV1 239 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-201ENST00000331239 ZBTB8AQ96BR9 441 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 WBP1Q96G27 269 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CDCA4Q9BXL8 241 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 CLN6Q9NWW5 311 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 TAS2R16Q9NYV7 291 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 KLRF1Q9NZS2 232 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 TMCC3Q9ULS5 477 aa8.64□□□□□ -1.03
C11orf54-201ENST00000331239 TRBV4-1A0A0J9YWV2 114 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 ISPDA4D126 451 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 TRAPPC13A5PLN9 417 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 FFAR1O14842 300 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 UPK1BO75841 260 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 NEURL1O76050 574 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 GASTP01350 101 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 HSMCR30P0CW71 290 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 POU1F1P28069 291 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 SLC1A3P43003 542 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 OR1C1Q15619 314 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 TIMM50Q3ZCQ8 353 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 SLC22A16Q86VW1 577 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 PLCZ1Q86YW0 608 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 LACC1Q8IV20 430 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 PRR22Q8IZ63 422 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 FAM98AQ8NCA5 519 aaKnown RBP8.63□□□□□ -1.03
C11orf54-201ENST00000331239 ZCCHC14Q8WYQ9 949 aaKnown RBP8.63□□□□□ -1.03
C11orf54-201ENST00000331239 MCHR1Q99705 422 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 SPOCK3Q9BQ16 436 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 CHCHD6Q9BRQ6 235 aa8.63□□□□□ -1.03
C11orf54-201ENST00000331239 NXF2Q9GZY0 626 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms