RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TMPRSS11FQ6ZWK6 438 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 FGD2Q7Z6J4 655 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 NKAIN4Q8IVV8 208 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 FAM81AQ8TBF8 368 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 TUBA1CQ9BQE3 449 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 TBL1XR1Q9BZK7 514 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 IL20Q9NYY1 176 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 OSGIN2Q9Y236 505 aa14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 CHCHD2Q9Y6H1 151 aaPredicted RBP14.91□□□□□ -0.02
PDLIM1-201ENST00000329399 A0A1B0GWA3 101 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 SNTNA6NMZ2 147 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 NDUFB5O43674 189 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 LYPD3O95274 346 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 CRYABP02511 175 aaKnown RBP14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 PRG2P13727 222 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 EEF1B2P24534 225 aaKnown RBP14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 GIPRP48546 466 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 DNASE1L1P49184 302 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 HOXC5Q00444 222 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 CDK5Q00535 292 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 FOXO1Q12778 655 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 SKP2Q13309 424 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 TMEM44Q2T9K0 475 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 CTU2Q2VPK5 515 aaKnown RBP14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 ALG10BQ5I7T1 473 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 MEDAGQ5VYS4 303 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 C12orf73Q69YU5 71 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 OPN5Q6U736 354 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 RTL4Q6ZR62 310 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 ENTHD1Q8IYW4 607 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 ZFP62Q8NB50 900 aaPredicted RBP14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 OR2M7Q8NG81 312 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 OR8J1Q8NGP2 316 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 TEX47Q8TBZ9 253 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 PHOSPHO1Q8TCT1 267 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 SPACA9Q96E40 222 aaPredicted RBP14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 DUSP21Q9H596 190 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 TIMMDC1Q9NPL8 285 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 CTPS2Q9NRF8 586 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 MED17Q9NVC6 651 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 CLN6Q9NWW5 311 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 ERRFI1Q9UJM3 462 aaPredicted RBP14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 KLF13Q9Y2Y9 288 aaPredicted RBP14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 PCDHGB1Q9Y5G3 927 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 SNX5Q9Y5X3 404 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 CRYBG3Q68DQ2 2970 aa14.9□□□□□ -0.02
PDLIM1-201ENST00000329399 M0R3G1 203 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 FADS1O60427 444 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 BCAS1O75363 584 aaPredicted RBP14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 RCBTB2O95199 551 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 THY1P04216 161 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 ELK4P28324 431 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 EPHA2P29317 976 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 IDH2P48735 452 aaKnown RBP14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 SUMO3P55854 103 aaPredicted RBP14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 PLAURQ03405 335 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 PRAMEF20Q5VT98 475 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 SLC27A4Q6P1M0 643 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 PTCHD4Q6ZW05 846 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 NRMQ8IXM6 262 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 SLC38A2Q96QD8 506 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 PRR14Q9BWN1 585 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 POLDIP3Q9BY77 421 aaKnown RBP14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 SDHAF3Q9NRP4 125 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 RNF6Q9Y252 685 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 MED12Q93074 2177 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 A0A087WUJ7 227 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 HMGN1P05114 100 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 ATP6V1B1P15313 513 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 JUNBP17275 347 aaPredicted RBP14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 PGCP20142 388 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 CNR1P21554 472 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 POU1F1P28069 291 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 MSX1P28360 303 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 ALDH3B2P48448 385 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 SLC9A3P48764 834 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 MVKQ03426 396 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 NTRK2Q16620 822 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 ANKDD1AQ495B1 522 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 TMEM201Q5SNT2 666 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 GFRALQ6UXV0 394 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 GPALPP1Q8IXQ4 340 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 SVOPQ8N4V2 548 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 POGLUT1Q8NBL1 392 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 PAQR8Q8TEZ7 354 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 TMEM255BQ8WV15 326 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 MYDGFQ969H8 173 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 SGCZQ96LD1 299 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 GPR137Q96N19 417 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 TMEM43Q9BTV4 400 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 CNOT2Q9NZN8 540 aaKnown RBP14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 FLRT3Q9NZU0 649 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 ICAM5Q9UMF0 924 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 BAIAP2Q9UQB8 552 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 CDH10Q9Y6N8 788 aa14.89□□□□□ -0.03
PDLIM1-201ENST00000329399 UNC119BA6NIH7 251 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 FAM166BA8MTA8 275 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 KLRC4-KLRK1H3BQV0 150 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 ICOSLGO75144 302 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 TP53P04637 393 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms