RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GLRX2Q9NS18 164 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 MRPS18CQ9Y3D5 142 aaKnown RBP10.96□□□□□ -0.65
SHMT2-201ENST00000328923 SNRPGP15A8MWD9 76 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 KLHL18O94889 574 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 CPSF4O95639 269 aaKnown RBP10.96□□□□□ -0.66
SHMT2-201ENST00000328923 SFTA3P0C7M3 94 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 OSMP13725 252 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 FOSL2P15408 326 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 ACVRL1P37023 503 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 GLP1RP43220 463 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 RAP1AP62834 184 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 RING1Q06587 406 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 HYAL4Q2M3T9 481 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 EOGTQ5NDL2 527 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 COMTD1Q86VU5 262 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 Q8NFD4 153 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 OR4D9Q8NGE8 314 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 OR1J4Q8NGS1 313 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 HAVCR2Q8TDQ0 301 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 PHYHIPQ92561 330 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 FUBP3Q96I24 572 aaKnown RBP eCLIP10.96□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF558Q96NG5 402 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 TAAR9Q96RI9 348 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 ADAM2Q99965 735 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 SNHG12Q9BXW3 62 aa10.96□□□□□ -0.66
SHMT2-201ENST00000328923 FRMPD3Q5JV73 1810 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 FAM86C2PA6NEL3 165 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 STK16O75716 305 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 TXNDC12O95881 172 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 SFTPBP07988 381 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 LINC00614P0C842 121 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 MAT2AP31153 395 aaKnown RBP10.95□□□□□ -0.66
SHMT2-201ENST00000328923 GJA4P35212 333 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 GDF5P43026 501 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PRKXP51817 358 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 WDR5P61964 334 aaKnown RBP10.95□□□□□ -0.66
SHMT2-201ENST00000328923 CSRP2Q16527 193 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 ACTBL2Q562R1 376 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF805Q5CZA5 627 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF770Q6IQ21 691 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-201ENST00000328923 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 RANBP3LQ86VV4 465 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PPP1R3BQ86XI6 285 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 GPR148Q8TDV2 347 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 XAGE5Q8WWM1 108 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 SORCS1Q8WY21 1168 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 GAL3ST3Q96A11 431 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 MVB12AQ96EY5 273 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 MIEF1Q9NQG6 463 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PTGFRNQ9P2B2 879 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 SCML2Q9UQR0 700 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 KCNE1BA0A087WTH5 132 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 TMEM272A0A1B0GTI8 110 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 IQCF5A8MTL0 148 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 INSIG1O15503 277 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 BCL2L11O43521 198 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 B3GAT3O94766 335 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 DIRAS3O95661 229 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 THBS1P07996 1170 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 ITGA5P08648 1049 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 THEGLP0DJG4 465 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 GAAP10253 952 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 CLUP10909 449 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 AMD1P17707 334 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 CR2P20023 1033 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 OR1E1P30953 314 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 SLC7A9P82251 487 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PITPNAQ00169 270 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 MEF2DQ14814 521 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 C11orf88Q6PI97 169 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 TSSK4Q6SA08 328 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 TIPARPQ7Z3E1 657 aaKnown RBP10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PRICKLE2Q7Z3G6 844 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PARGQ86W56 976 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 CLECL1Q8IZS7 167 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF485Q8NCK3 441 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 OR2AK2Q8NG84 335 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 OR4F15Q8NGB8 312 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 DUSP19Q8WTR2 217 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PHYHIPLQ96FC7 376 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 SMAD5Q99717 465 aaKnown RBP10.95□□□□□ -0.66
SHMT2-201ENST00000328923 IL17BQ9UHF5 180 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF230Q9UIE0 474 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-201ENST00000328923 MAP4K5Q9Y4K4 846 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
SHMT2-201ENST00000328923 A0A0D9SG52 128 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 TRBV4-1A0A0J9YWV2 114 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 DUXAA6NLW8 204 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 A6NNC1 897 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 PHOX2AO14813 284 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 CRYABP02511 175 aaKnown RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 SLC26A5P58743 744 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 RBX1P62877 108 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 HSD11B2P80365 405 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 EGR3Q06889 387 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF791Q3KP31 576 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 GFI1BQ5VTD9 330 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 NOXRED1Q6NXP6 359 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 DEGS2Q6QHC5 323 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms