RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 HCN1O60741 890 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 FZD7O75084 574 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 SOX14O95416 240 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 MT-ATP6P00846 226 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 BGLAPP02818 100 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 CHMP24386 653 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 POLR2IP36954 125 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 RPS5P46782 204 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 CLK1P49759 484 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 CRISP1P54107 249 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 PPIAP62937 165 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 TAF11Q15544 211 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 SYT14P1Q58G82 188 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 CMPK2Q5EBM0 449 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 FAM69AQ5T7M9 428 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 RPL13AP3Q6NVV1 102 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 Q6ZS92 163 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 FAM109AQ8N4B1 249 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 FANK1Q8TC84 345 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC39A7Q92504 469 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 ANKRD60Q9BZ19 345 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 FKRPQ9H9S5 495 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF229Q9UJW7 825 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 SIGLEC7Q9Y286 467 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF337Q9Y3M9 751 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 LRRN3E7EW58 273 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 BCKDKO14874 412 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 OR2T1O43869 369 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 TRAPPC6AO75865 159 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 TFPIP10646 304 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 FUT1P19526 365 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 EPHA2P29317 976 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 MAGEA5P43359 124 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 KEAP1Q14145 624 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 C1QL3Q5VWW1 255 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 USP51Q70EK9 711 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 OAFQ86UD1 273 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 C10orf53Q8N6V4 93 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 RBMXL3Q8N7X1 1067 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 TEX47Q8TBZ9 253 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 SFXN2Q96NB2 322 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 MOGAT1Q96PD6 335 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 LOC100130705A0A1B0GUX0 176 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ZAR1LA6NP61 321 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 H3BML4 177 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 H3BN98 237 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 LINC01387J3KSC0 135 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 K7EM74 188 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 DENRO43583 198 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 IGFBP1P08833 259 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 PEPDP12955 493 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 IDUAP35475 653 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 RPS4XP62701 263 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 LTBQ06643 244 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ZBED5Q49AG3 693 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 WIPI1Q5MNZ9 446 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 CHERPQ8IWX8 916 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC43A2Q8N370 569 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ATP6V1C2Q8NEY4 427 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 MFSD8Q8NHS3 518 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 OSTF1Q92882 214 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ABHD17AQ96GS6 310 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 HRASLS5Q96KN8 279 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 PLA2G12AQ9BZM1 189 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 EGLN3Q9H6Z9 239 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 TMEM185BQ9H7F4 350 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC25A19Q9HC21 320 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 NANSQ9NR45 359 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 TBC1D23Q9NUY8 699 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 IL20Q9NYY1 176 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 NDRG4Q9ULP0 352 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 TP53TG5Q9Y2B4 290 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 FREM3P0C091 2139 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 TRAV27A0A087WT01 109 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 GJE1A6NN92 205 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 FTCDNL1E5RQL4 147 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 PTP4A3O75365 173 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 RCBTB2O95199 551 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 CELA3AP09093 270 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ASAH2BP0C7U1 165 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 GFRA1P56159 465 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 RAC1P63000 192 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 IL18R1Q13478 541 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 FHL1Q13642 323 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 MFSD13AQ14CX5 517 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 PTGES3Q15185 160 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ANKDD1AQ495B1 522 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 SMARCD3Q6STE5 483 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 MAMDC2Q7Z304 686 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 LRRC17Q8N6Y2 441 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 OR8D4Q8NGM9 314 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ARL5BQ96KC2 179 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 OR52D1Q9H346 318 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ZDHHC11Q9H8X9 412 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 MCCC2Q9HCC0 563 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 ACKR4Q9NPB9 350 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 TUBD1Q9UJT1 453 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 LRCH1Q9Y2L9 728 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 HDGFL3Q9Y3E1 203 aa9.23□□□□□ -0.93
VIPAS39-201ENST00000327028 GNAO1P09471 354 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms