RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 NME1P15531 152 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 GABRR2P28476 465 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ACVRL1P37023 503 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SNCAP37840 140 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 OPRD1P41143 372 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 RAG2P55895 527 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 RIN1Q13671 783 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF124Q15973 351 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 XKR7Q5GH72 579 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ALG10BQ5I7T1 473 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CLEC9AQ6UXN8 241 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TXN2Q99757 166 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TBL1XR1Q9BZK7 514 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ASB6Q9NWX5 421 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SHPKQ9UHJ6 478 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 POMT2Q9UKY4 750 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 GFRA2O00451 464 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TAAR5O14804 337 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TCAPO15273 167 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TGOLN2O43493 480 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 EPHX1P07099 455 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CAV2P51636 162 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 RING1Q06587 406 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TARBP2Q15633 366 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 NIPAL3Q6P499 406 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SUSD1Q6UWL2 747 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 KDM8Q8N371 416 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ZCCHC10Q8TBK6 192 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PGAP3Q96FM1 320 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 KLHL15Q96M94 604 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 DGAT2Q96PD7 388 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TGM7Q96PF1 710 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 WDR83Q9BRX9 315 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TMPRSS5Q9H3S3 457 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM127O75204 238 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SFTA3P0C7M3 94 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CSF2RAP15509 400 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 MAP4K2Q12851 820 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ARL6IP1Q15041 203 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF852Q6ZMS4 543 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 DPPA4Q7L190 304 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 RBM23Q86U06 439 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SERPINA12Q8IW75 414 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CCDC116Q8IYX3 515 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 POC1BQ8TC44 478 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SUSD3Q96L08 255 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 STK17BO94768 372 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 KCNK5O95279 499 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 HTR2CP28335 458 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 AKT2P31751 481 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 DHCR24Q15392 516 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 PGGHGQ32M88 737 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 LRRC73Q5JTD7 316 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 FCRLAQ7L513 359 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 DUSP19Q8WTR2 217 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 KLHL42Q9P2K6 505 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 A0A087X0M5 115 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 A0A1B0GX30 115 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 BCL2L11O43521 198 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 LDB2O43679 373 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CBLP22681 906 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 RPS24P62847 133 aaKnown RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF322Q6U7Q0 402 aaPredicted RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 NAXDQ8IW45 347 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF440Q8IYI8 595 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 DDX31Q9H8H2 851 aaKnown RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF629Q9UEG4 869 aaPredicted RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CHRNA9Q9UGM1 479 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 PLEKHM1Q9Y4G2 1056 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 M0R3H8 397 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 LGALS8O00214 317 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 NFKBIEO00221 500 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 GPRIN2O60269 458 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 PTP4A3O75365 173 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CLRN1P58418 232 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF266Q14584 549 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 KIAA0319Q5VV43 1072 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ETV3LQ6ZN32 361 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 PLPP6Q8IY26 295 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 LILRB2Q8N423 598 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OR2T4Q8NH00 348 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OR51A7Q8NH64 312 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OLIG1Q8TAK6 271 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 MIB2Q96AX9 1013 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 RBMXL1Q96E39 390 aaKnown RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 LMF1Q96S06 567 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CMKLR1Q99788 373 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OR51M1Q9H341 326 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 SRMSQ9H3Y6 488 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ACSS1Q9NUB1 689 aaPredicted RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 IL20RAQ9UHF4 553 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 KLF15Q9UIH9 416 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 FBXO24O75426 580 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 C1GALT1C1LP0DN25 315 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 IFITM2Q01629 132 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OR2G6Q5TZ20 316 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 GDPD4Q6W3E5 623 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 SLC39A7Q92504 469 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CORO2AQ92828 525 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 HLA-CQ95604 372 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms