RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 IL32P24001 234 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 RPE65Q16518 533 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 GLB1L2Q8IW92 636 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 OR7G2Q8NG99 324 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 ABHD1Q96SE0 405 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 ARHGDIGQ99819 225 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 AUNIPQ9H7T9 357 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 LIN7BQ9HAP6 207 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 HPF1Q9NWY4 346 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 SDHAF2Q9NX18 166 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 DHDHQ9UQ10 334 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 TSC2P49815 1807 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 OTOFQ9HC10 1997 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF593O00488 134 aaPredicted RBP11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 RAB3DO95716 219 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 TRHRP34981 398 aaPredicted RBP11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 TSFMP43897 325 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 METAP1P53582 386 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 HCCSP53701 268 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 SMCO1Q147U7 214 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 KCTD18Q6PI47 426 aaPredicted RBP11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 C19orf48Q6RUI8 117 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 C9orf62Q8N4C0 152 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 PHYHIPQ92561 330 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 NXPE3Q969Y0 559 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 CMKLR1Q99788 373 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 PCDHB16Q9NRJ7 776 aa11.8□□□□□ -0.52
DNMT3A-202ENST00000321117 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 TVP23AA6NH52 213 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 NPC1O15118 1278 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 GPR75O95800 540 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 RLN2P04090 185 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 CCL5P13501 91 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 CCR2P41597 374 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 PRKXP51817 358 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 EIF2B5Q13144 721 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 AGERQ15109 404 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 AANATQ16613 207 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ALG11Q2TAA5 492 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 TMEFF1Q8IYR6 380 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ARL14Q8N4G2 192 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 SMARCD2Q92925 531 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ARSGQ96EG1 525 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 WDR92Q96MX6 357 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 MYADMQ96S97 322 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 NMNAT3Q96T66 252 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 TBL1XR1Q9BZK7 514 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 F5P12259 2224 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 HIDE1A8MVS5 230 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 LEUTXA8MZ59 168 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 THBS1P07996 1170 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 GIMD1P0DJR0 217 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 DBPQ10586 325 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 CLLU1Q5K131 121 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF793Q6ZN11 406 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 OVCH1Q7RTY7 1134 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 LNX2Q8N448 690 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 DNAAF1Q8NEP3 725 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 OR2A1Q8NGT9 310 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 AHCYL2Q96HN2 611 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 AIFM2Q9BRQ8 373 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 PRTFDC1Q9NRG1 225 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 PNO1Q9NRX1 252 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 PEX12O00623 359 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 EPXP11678 715 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ANXA7P20073 488 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 S1PR1P21453 382 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 AKT2P31751 481 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 MMP15P51511 669 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF77Q15935 545 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ARTNQ5T4W7 220 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 EID2Q8N6I1 236 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 OR52R1Q8NGF1 315 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 ASB12Q8WXK4 309 aa11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 TSACCQ96A04 125 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 EXOGQ9Y2C4 368 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-202ENST00000321117 TMEM150CB9EJG8 249 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 CD34P28906 385 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SORDQ00796 357 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 TRMT12Q53H54 448 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ALG10Q5BKT4 473 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 CMTM4Q8IZR5 234 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 MRPL43Q8N983 215 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SMIM4Q8WVI0 70 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SPACA7Q96KW9 195 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 KLHL15Q96M94 604 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 DPYSL5Q9BPU6 564 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 APOOQ9BUR5 198 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 HRASLSQ9HDD0 168 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 CLDND1Q9NY35 253 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 NCDNQ9UBB6 729 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ACAD8Q9UKU7 415 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 TMEM72A0PK05 275 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ATP6V1G2-DDX39BF2Z307 99 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SULT1B1O43704 296 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms