RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CCINQ13939 588 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 GARNL3Q5VVW2 1013 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 NIPAL3Q6P499 406 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 TMPRSS9Q7Z410 1059 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 TPRA1Q86W33 373 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 ZNF511Q8NB15 262 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 OR5L2Q8NGL0 311 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 FAM174AQ8TBP5 190 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 ATG5Q9H1Y0 275 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 CACNG2Q9Y698 323 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 SPTY2D1-AS1A0A0U1RR47 76 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 A0A1B0GVI7 797 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 A0A1W2PPC4 97 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 CENPBD1B2RD01 187 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 C2CD4DB7Z1M9 353 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 UTS2O95399 124 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 CLRN1P58418 232 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 CARD17Q5XLA6 110 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 SFXN4Q6P4A7 337 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 RPL22L1Q6P5R6 122 aaKnown RBP12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 GDPD3Q7L5L3 318 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 OR2L13Q8N349 312 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 GABRG3Q99928 467 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 TMEM185BQ9H7F4 350 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 BCAT2O15382 392 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 ZNF432O94892 652 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 GTF2F2P13984 249 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 CXCL12P48061 93 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 MTNR1BP49286 362 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 SNRPD2P62316 118 aaKnown RBP12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 RACK1P63244 317 aaKnown RBP12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 HSD11B2P80365 405 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 ACY1Q03154 408 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 SSX1Q16384 188 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 PRSS53Q2L4Q9 553 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 QSOX2Q6ZRP7 698 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 RCBTB1Q8NDN9 531 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 NLGN4YQ8NFZ3 816 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 OR4Q3Q8NH05 313 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 SMAP2Q8WU79 429 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 LCORQ96JN0 433 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 Q96M85 177 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 CRB3Q9BUF7 120 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 PRRG4Q9BZD6 226 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 INIPQ9NRY2 104 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 POU2F3Q9UKI9 436 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 ADAM18Q9Y3Q7 739 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 PTPRDP23468 1912 aa12.37□□□□□ -0.43
PCDHB9-201ENST00000316105 THSD7BQ9C0I4 1608 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 PHYHO14832 338 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 SMAD9O15198 467 aaKnown RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 SLC16A7O60669 478 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 CCR5P51681 352 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 EEF1A2Q05639 463 aaKnown RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 HTR4Q13639 388 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 TPBGQ13641 420 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 CBFBQ13951 182 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 KLHL26Q53HC5 615 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 FGF20Q9NP95 211 aaPredicted RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 HMX3A6NHT5 357 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 HBQ1P09105 142 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 MAKP20794 623 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ERP29P30040 261 aaKnown RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 FRKP42685 505 aaPredicted RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 EMP2P54851 167 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 GFERP55789 205 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 CDK5Q00535 292 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 TLE3Q04726 772 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ARFRP1Q13795 201 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 MAPK14Q16539 360 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 MFSD4AQ8N468 514 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 C16orf52Q8NHV5 167 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 CEP76Q8TAP6 659 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 GPR148Q8TDV2 347 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ZNF578Q96N58 590 aaPredicted RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ARHGAP9Q9BRR9 750 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ZNF350Q9GZX5 532 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 FGF21Q9NSA1 209 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 COQ3Q9NZJ6 369 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 SRPK3Q9UPE1 567 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 FARSAQ9Y285 508 aaKnown RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 STARP49675 285 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ZNF81P51508 661 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 OR1D5P58170 312 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 PUDPQ08623 228 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 MRM1Q6IN84 353 aaKnown RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 METAP1DQ6UB28 335 aaPredicted RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 OR4N2Q8NGD1 307 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 ZNF764Q96H86 408 aaPredicted RBP12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 SLC46A1Q96NT5 459 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 OR10A4Q9H209 315 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 KLHL9Q9P2J3 617 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 MBD2Q9UBB5 411 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 REV1Q9UBZ9 1251 aa12.36□□□□□ -0.43
PCDHB9-201ENST00000316105 TP53I11O14683 189 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms