RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 DIMT1Q9UNQ2 313 aaKnown RBP12.77□□□□□ -0.36
CLCN6-201ENST00000312413 USP22Q9UPT9 525 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 TMEM212A6NML5 194 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 OR8G3PP0DMU2 310 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 CD79AP11912 226 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 SHC1P29353 583 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 NTSR1P30989 418 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 PTGER1P34995 402 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 OR52W1Q6IF63 320 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 TSSK2Q96PF2 358 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 CD53P19397 219 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 CR2P20023 1033 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 HIST1H1TP22492 207 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-201ENST00000312413 VIPR2P41587 438 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 KIR2DS3Q14952 304 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF705AQ6ZN79 300 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-201ENST00000312413 KIAA0907Q7Z7F0 614 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-201ENST00000312413 RAB39BQ96DA2 213 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 UHRF2Q96PU4 802 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 MCOLN1Q9GZU1 580 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 LIN7BQ9HAP6 207 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 NOX4Q9NPH5 578 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 PURGQ9UJV8 347 aaKnown RBP12.77□□□□□ -0.37
CLCN6-201ENST00000312413 CAMK2AQ9UQM7 478 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 SLC9B1P1A6NJY1 282 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 LILRB3O75022 631 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 LDB3O75112 727 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 HBQ1P09105 142 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 OR2T7P0C7T2 308 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 JUNBP17275 347 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-201ENST00000312413 RPS15P62841 145 aaKnown RBP12.77□□□□□ -0.37
CLCN6-201ENST00000312413 LINC00299Q6ZSB3 139 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 OR2T27Q8NH04 317 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 SFXN2Q96NB2 322 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 TXN2Q99757 166 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
CLCN6-201ENST00000312413 ANKRD12Q6UB98 2062 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 KDM4EB2RXH2 506 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-201ENST00000312413 SLC16A6O15403 523 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 AP1G1O43747 822 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 CBR1P16152 277 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 NDUFA6P56556 154 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 KCNJ10P78508 379 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ILKQ13418 452 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 OR13C2Q8NGS9 318 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ABHD4Q8TB40 342 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 MARC2Q969Z3 335 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 CPNE4Q96A23 557 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF582Q96NG8 517 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-201ENST00000312413 TAS2R16Q9NYV7 291 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 DNAJB11Q9UBS4 358 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 MYH6P13533 1939 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 OR52A4PA6NMU1 304 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 SGK494L7N484 410 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ELK1P19419 428 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 OMGP23515 440 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 HTR2CP28335 458 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 TMPRSS7Q7RTY8 843 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF761Q86XN6 746 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-201ENST00000312413 SCARB1Q8WTV0 552 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ASB11Q8WXH4 323 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 OR5M11Q96RB7 305 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 SIDT1Q9NXL6 827 aaKnown RBP12.76□□□□□ -0.37
CLCN6-201ENST00000312413 TRAPPC2P0DI81 140 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 TRAPPC2BP0DI82 140 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 XCR1P46094 333 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 THBS3P49746 956 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 SF3B4Q15427 424 aaKnown RBP eCLIP12.76□□□□□ -0.375e-7■■■□□ 18.6
CLCN6-201ENST00000312413 LRRTM3Q86VH5 581 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF480Q8WV37 535 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 SLC7A6Q92536 515 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 A0A087WZY1 265 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 A0A0A6YYC8 382 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-201ENST00000312413 SMLR1H3BR10 107 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 I3L1I5 382 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-201ENST00000312413 M0QZQ0 153 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 ACOT8O14734 319 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 GCH1P30793 250 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 RABIFP47224 123 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 KIAA1024LP59773 190 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 RUNX3Q13761 415 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 GPR176Q14439 515 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 CD276Q5ZPR3 534 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 METTL9Q9H1A3 318 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 PRSS21Q9Y6M0 314 aa12.76□□□□□ -0.37
CLCN6-201ENST00000312413 IGKV6D-21A0A0A0MT36 114 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 A0A0J9YY10 115 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 CHRM4P08173 479 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 IDUAP35475 653 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 EXOSC7Q15024 291 aaKnown RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 SLC14A2Q15849 920 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 SKA3Q8IX90 412 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 BSCL2Q96G97 398 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 FOXN4Q96NZ1 517 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 OR11A1Q9GZK7 315 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 SIAEQ9HAT2 523 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 COL1A1P02452 1464 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ANKRD34BA5PLL1 514 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms