RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 Q96M85 177 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 CNN2Q99439 309 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 PRDM9Q9NQV7 894 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 CHURC1-FNTBB4DL54 471 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 CPNE3O75131 537 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 SNRPBP14678 240 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 HOXD12P35452 270 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 GRK6P43250 576 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 FNTBP49356 437 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 GDI2P50395 445 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 RPL6Q02878 288 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 ODF4Q2M2E3 257 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 EXOSC6Q5RKV6 272 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 LEG1Q6P5S2 330 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 OR6C4Q8NGE1 309 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 ZNF671Q8TAW3 534 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 THAP4Q8WY91 577 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 OR14A2Q96R54 314 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 NXF5Q9H1B4 397 aaKnown RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 POLE3Q9NRF9 147 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 UCKL1Q9NWZ5 548 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 PAQR5Q9NXK6 330 aaPredicted RBP10.59□□□□□ -0.71
PTPN2-201ENST00000309660 TEKT2Q9UIF3 430 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 PLCL2Q9UPR0 1127 aa10.59□□□□□ -0.71
PTPN2-201ENST00000309660 A0A0B4J293 547 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 IGHV1OR15-9A0A0B4J2B8 117 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 SCDO00767 359 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 NSA2O95478 260 aaKnown RBP10.58□□□□□ -0.72
PTPN2-201ENST00000309660 MTNR1BP49286 362 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 ACSM1Q08AH1 577 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 HBMQ6B0K9 141 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 SLC35F2Q8IXU6 374 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 IZUMO1Q8IYV9 350 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 SLC35B4Q969S0 331 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 ELF4Q99607 663 aaPredicted RBP10.58□□□□□ -0.72
PTPN2-201ENST00000309660 FOXQ1Q9C009 403 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 SLC25A18Q9H1K4 315 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 BRD7Q9NPI1 651 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 OR6C68A6NDL8 312 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 TMEM150CB9EJG8 249 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 LANCL1O43813 399 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 CENPAP49450 140 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 SRP9P49458 86 aaKnown RBP10.58□□□□□ -0.72
PTPN2-201ENST00000309660 GBX2P52951 348 aaPredicted RBP10.58□□□□□ -0.72
PTPN2-201ENST00000309660 ST6GAL2Q96JF0 529 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 FOXN4Q96NZ1 517 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 KLHDC3Q9BQ90 382 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 NANSQ9NR45 359 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 PLSCR3Q9NRY6 295 aa10.58□□□□□ -0.72
PTPN2-201ENST00000309660 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ACOD1A6NK06 481 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 RAB3BP20337 219 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 RACK1P63244 317 aaKnown RBP10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ACTC1P68032 377 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ACTA1P68133 377 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ZP2Q05996 745 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 VWA2Q5GFL6 755 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 FAM181AQ8N9Y4 354 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 C3orf49Q96BT1 292 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 PELI1Q96FA3 418 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 MOGAT1Q96PD6 335 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ABCG5Q9H222 651 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 RBFOX1Q9NWB1 397 aaKnown RBP10.57□□□□□ -0.72
PTPN2-201ENST00000309660 MTCH2Q9Y6C9 303 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 PCDH15Q96QU1 1955 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 TRAV6A0A075B6T7 132 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ANKRD61A6NGH8 418 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 TVP23AA6NH52 213 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 OR6C70A6NIJ9 312 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 HCRTR2O43614 444 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 PLPP2O43688 288 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 CD3GP09693 182 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 OR1D5P58170 312 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 LGALS3BPQ08380 585 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 C6orf183Q5T699 404 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 JAZF1Q86VZ6 243 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 TMEM151BQ8IW70 566 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 LSMEM1Q8N8F7 131 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 OR5H6Q8NGV6 325 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 CTRCQ99895 268 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 TMEM43Q9BTV4 400 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 CHRNA9Q9UGM1 479 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 COPS3Q9UNS2 423 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 BAIAP2Q9UQB8 552 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 VPS13AQ96RL7 3174 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 A0A087WUJ7 227 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 SLC19A2O60779 497 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 SLC2A5P22732 501 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 RBM34P42696 430 aaKnown RBP10.57□□□□□ -0.72
PTPN2-201ENST00000309660 TAS2R43P59537 309 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 CTXN1P60606 82 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF141Q15928 474 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 APOOLQ6UXV4 268 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 GRAMD2AQ8IUY3 354 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 GPR135Q8IZ08 494 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 OR4D9Q8NGE8 314 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 CHAC2Q8WUX2 184 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 SLC7A6Q92536 515 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms