RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 H7C1C5 153 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 LCN6P62502 163 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 RELAQ04206 551 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMEM92Q6UXU6 159 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 ZNF620Q6ZNG0 422 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 TPRA1Q86W33 373 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 MISPQ8IVT2 679 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLC35F3Q8IY50 421 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 CCDC36Q8IYA8 594 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 SPEM1Q8N4L4 309 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 MRI1Q9BV20 369 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 ULBP3Q9BZM4 244 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 NINQ8N4C6 2090 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 SIGLEC6O43699 453 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 CD63P08962 238 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 OR8G3PP0DMU2 310 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 ANXA3P12429 323 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 PER3P56645 1201 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 C17orf67Q0P5P2 114 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 SCRN3Q0VDG4 424 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 FAM53BQ14153 422 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 VASNQ6EMK4 673 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 FBXO42Q6P3S6 717 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 USP51Q70EK9 711 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 GALNT6Q8NCL4 622 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 GHSRQ92847 366 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 OR2A14Q96R47 310 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLC38A1Q9H2H9 487 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 MEPEQ9NQ76 525 aaPredicted RBP10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 V9GY05 133 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 WDR90Q96KV7 1748 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 A0A1B0GVC2 190 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 OR14I1A6ND48 311 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 A6NIN4 97 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 SMAD9O15198 467 aaKnown RBP10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 RLN2P04090 185 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 LCN1P31025 176 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 SIRPAP78324 504 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 GXYLT1Q4G148 440 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 C8orf82Q6P1X6 216 aaPredicted RBP10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 NANOGP1Q8N7R0 232 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 OR52N1Q8NH53 320 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 HOXB13Q92826 284 aaPredicted RBP10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 TAS2R8Q9NYW2 309 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 MOKQ9UQ07 419 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 RNF215Q9Y6U7 377 aa10.55□□□□□ -0.72
PCDHGC3-201ENST00000308177 TRAV36DV7A0A075B6V5 113 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMED7-TICAM2A0A0A6YYA0 188 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 L7N2F9 121 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 PRAMEF4O60810 478 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 IFNA7P01567 189 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 RBMS1P29558 406 aaKnown RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 NKAIN1Q4KMZ8 207 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 PRAMEF9Q5VWM5 478 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 C5orf46Q6UWT4 87 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 CLDN22Q8N7P3 220 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 INO80EQ8NBZ0 244 aaPredicted RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 CASTOR1Q8WTX7 329 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 FAM46BQ96A09 425 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 LRRC61Q9BV99 259 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 CDCA4Q9BXL8 241 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 METTL8Q9H825 291 aaKnown RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 ELOVL3Q9HB03 270 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 ZNF226Q9NYT6 803 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 PISDQ9UG56 409 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMED7Q9Y3B3 224 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 CDHR4A6H8M9 788 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 METTL15A6NJ78 407 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 H0YIG0 161 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 K7EQS6 105 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 YKT6O15498 198 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 NARSO43776 548 aaKnown RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 DRD5P21918 477 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 MESP2Q0VG99 397 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 OR7E24Q6IFN5 339 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 LRRC28Q86X40 367 aaPredicted RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLC43A2Q8N370 569 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 C16orf52Q8NHV5 167 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 ITPKCQ96DU7 683 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 THAP7Q9BT49 309 aaPredicted RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 MMP28Q9H239 520 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 NUDT15Q9NV35 164 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLC7A11Q9UPY5 501 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 ZNF281Q9Y2X9 895 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMEM129A0AVI4 362 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 KDM4EB2RXH2 506 aaPredicted RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 LMO7DNF2Z398 122 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 FNTBP49356 437 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 SMAD2Q15796 467 aaKnown RBP10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 VWA2Q5GFL6 755 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 NKAPLQ5M9Q1 402 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 MARCH3Q86UD3 253 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 ADAMTS14Q8WXS8 1223 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 CCDC74AQ96AQ1 378 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 ARSGQ96EG1 525 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 HHLA2Q9UM44 414 aa10.54□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMX2-CTNND1H3BSU7 103 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 CTSVO60911 334 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 NCR1O76036 304 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms