RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 DVL3Q92997 716 aaPredicted RBP13.89□□□□□ -0.19
SCN3B-201ENST00000299333 CD68P34810 354 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 DAP3P51398 398 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 BAXQ07812 192 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 ENTPD8Q5MY95 495 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 OR7E24Q6IFN5 339 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 NDUFAF7Q7L592 441 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 KCTD12Q96CX2 325 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 PARP12Q9H0J9 701 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 CRLF2Q9HC73 371 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 B4GALT7Q9UBV7 327 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 TMEM269A0A1B0GVZ9 245 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 C2orf72A6NCS6 295 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 A6NIZ1 184 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 ELK1P19419 428 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 BCKDHBP21953 392 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 TRHRP34981 398 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC11A1P49279 550 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 RAP1BP61224 184 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 RAP1AP62834 184 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 FOXK1P85037 733 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 C1orf61Q13536 156 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 RPE65Q16518 533 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 GRASPQ7Z6J2 395 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 C1orf87Q8N0U7 546 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 CDS1Q92903 461 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 ACPTQ9BZG2 426 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 ELOVL3Q9HB03 270 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 LRIT2A6NDA9 550 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 GASTP01350 101 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 HMGN2P05204 90 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 THBS3P49746 956 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 OR2B8PP59922 312 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SUMO1P63165 101 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC5A12Q1EHB4 618 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 RPL22L1Q6P5R6 122 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SPRED1Q7Z699 444 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC7A6Q92536 515 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 IRF7Q92985 503 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 BTF3L4Q96K17 158 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 TMEM175Q9BSA9 504 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 MED20Q9H944 212 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 PSORS1C1Q9UIG5 152 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC9B1P1A6NJY1 282 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 D6RAR5 112 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 C17orf112F2Z3M2 114 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC16A7O60669 478 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 HOXA9P31269 272 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 REEP5Q00765 189 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 CNN3Q15417 329 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 EOGTQ5NDL2 527 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 NLRC3Q7RTR2 1065 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC46A3Q7Z3Q1 461 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 OR9K2Q8NGE7 335 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 FAM122AQ96E09 287 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 CMSS1Q9BQ75 279 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC6A17Q9H1V8 727 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 OR51B6Q9H340 312 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 PLEK2Q9NYT0 353 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 A0A1W2PP55 124 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 USF1P22415 310 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 ETV6P41212 452 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 HCCSP53701 268 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 RPS21P63220 83 aaKnown RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 GPR18Q14330 331 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 NSDHLQ15738 373 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 RTL6Q6ICC9 239 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 KANSL1Q7Z3B3 1105 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 PRR22Q8IZ63 422 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 TMEM102Q8N9M5 508 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-201ENST00000299333 FAM173AQ9BQD7 235 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 GSX2Q9BZM3 304 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 SLC2A4RGQ9NR83 387 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 KLK4Q9Y5K2 254 aa13.88□□□□□ -0.19
SCN3B-201ENST00000299333 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
SCN3B-201ENST00000299333 ZFP92A6NM28 416 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR2C1O95371 312 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 IGFBP1P08833 259 aaPredicted RBP13.87□□□□□ -0.19
SCN3B-201ENST00000299333 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF252P-AS1Q0IIN9 211 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 CLDN22Q8N7P3 220 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 CDRT4Q8N9R6 151 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR5M8Q8NGP6 311 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 FAM103A1Q9BTL3 118 aaKnown RBP13.87□□□□□ -0.19
SCN3B-201ENST00000299333 KATNB1Q9BVA0 655 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR10A5Q9H207 317 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR10A2Q9H208 303 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 PIGMQ9H3S5 423 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 ARL2-SNX15V9GYD0 113 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 UBL3O95164 117 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 HLA-HP01893 362 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 CPOXP36551 454 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 SRP9P49458 86 aaKnown RBP13.87□□□□□ -0.19
SCN3B-201ENST00000299333 MSMO1Q15800 293 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 PLCXD3Q63HM9 321 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR1M1Q8NGA1 313 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms