RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 AQP7O14520 342 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 FFAR1O14842 300 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 EIF4E2O60573 245 aaKnown RBP18.99■□□□□ 0.63
SMCO4-201ENST00000298966 CCNB2O95067 398 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 FBXO45P0C2W1 286 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 UBL4AP11441 157 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 IFNGR2P38484 337 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 PPP1R8Q12972 351 aaKnown RBP18.99■□□□□ 0.63
SMCO4-201ENST00000298966 KEAP1Q14145 624 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 ENTPD8Q5MY95 495 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 RIPPLY2Q5TAB7 128 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 IL20RBQ6UXL0 311 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 HMGN2P46Q86SG4 172 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 RBM45Q8IUH3 476 aaKnown RBP18.99■□□□□ 0.63
SMCO4-201ENST00000298966 DHRSXQ8N5I4 330 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 LSMEM1Q8N8F7 131 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 OR10G2Q8NGC3 310 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 SLC38A4Q969I6 547 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 SARAFQ96BY9 339 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 SECISBP2Q96T21 854 aaKnown RBP18.99■□□□□ 0.63
SMCO4-201ENST00000298966 TBL1XR1Q9BZK7 514 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 RLIMQ9NVW2 624 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 ALKBH4Q9NXW9 302 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 KIF17Q9P2E2 1029 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 ZNF264O43296 627 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 ICOSLGO75144 302 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 CYP7B1O75881 506 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 GLSO94925 669 aaPredicted RBP18.98■□□□□ 0.63
SMCO4-201ENST00000298966 CAPGP40121 348 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 MAGEA5P43359 124 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 YAP1P46937 504 aaKnown RBP18.98■□□□□ 0.63
SMCO4-201ENST00000298966 PIN1Q13526 163 aaPredicted RBP18.98■□□□□ 0.63
SMCO4-201ENST00000298966 GANABQ14697 944 aaKnown RBP18.98■□□□□ 0.63
SMCO4-201ENST00000298966 PDK3Q15120 406 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 EXOC3L2Q2M3D2 409 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 SLC36A3Q495N2 470 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 SWT1Q5T5J6 900 aaKnown RBP18.98■□□□□ 0.63
SMCO4-201ENST00000298966 KDM4DQ6B0I6 523 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 TMEM81Q6P7N7 255 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 PRR22Q8IZ63 422 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 TMEM251Q8N6I4 163 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 RNF138Q8WVD3 245 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 FAM173AQ9BQD7 235 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 LAT2Q9GZY6 243 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 LDAHQ9H6V9 325 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 EXO5Q9H790 373 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 ZNF556Q9HAH1 456 aa18.98■□□□□ 0.63
SMCO4-201ENST00000298966 KRCC1Q9NPI7 259 aaPredicted RBP18.98■□□□□ 0.63
SMCO4-201ENST00000298966 TMEFF2Q9UIK5 374 aaPredicted RBP18.98■□□□□ 0.63
SMCO4-201ENST00000298966 VPS13CQ709C8 3753 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 A0A0G2JMM0 328 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 A0A1W2PPB8 328 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 A0A1W2PRS3 328 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 CLDN24A6NM45 220 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 KIR3DP1A8MWS1 328 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 G3V3Y1 287 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 GTPBP1O00178 669 aaKnown RBP18.97■□□□□ 0.63
SMCO4-201ENST00000298966 WWP2O00308 870 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 TP53I11O14683 189 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 NDUFB5O43674 189 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 FADS1O60427 444 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 UGT2B11O75310 529 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 OR2J2O76002 312 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 OR6B1O95007 311 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 ATE1O95260 518 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 SNAP29O95721 258 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 RPSAP08865 295 aaKnown RBP18.97■□□□□ 0.63
SMCO4-201ENST00000298966 GABRA1P14867 456 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 CNR1P21554 472 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 PRKACGP22612 351 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 IGFBP5P24593 272 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 EVI2BP34910 448 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 RPS6KA3P51812 740 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 COPZ1P61923 177 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 ADARB1P78563 741 aaKnown RBP18.97■□□□□ 0.63
SMCO4-201ENST00000298966 NTRK2Q16620 822 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 FGD3Q5JSP0 725 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 C16orf47Q6ZP98 133 aaPredicted RBP18.97■□□□□ 0.63
SMCO4-201ENST00000298966 ATG16L2Q8NAA4 619 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 PHOSPHO1Q8TCT1 267 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 ADAMTS16Q8TE57 1224 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 CNOT9Q92600 299 aaKnown RBP18.97■□□□□ 0.63
SMCO4-201ENST00000298966 HGDQ93099 445 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 SPACA9Q96E40 222 aaPredicted RBP18.97■□□□□ 0.63
SMCO4-201ENST00000298966 SLC41A3Q96GZ6 507 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 MPP4Q96JB8 637 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 RASL10BQ96S79 203 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 WFDC6Q9BQY6 131 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 LIN28AQ9H9Z2 209 aaKnown RBP18.97■□□□□ 0.63
SMCO4-201ENST00000298966 SDHAF3Q9NRP4 125 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 MGAT4BQ9UQ53 548 aa18.97■□□□□ 0.63
SMCO4-201ENST00000298966 RTTNQ86VV8 2226 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 HTR3EA5X5Y0 456 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 FAM171A2A8MVW0 826 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 SUSD5O60279 629 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 TPST2O60704 377 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 ADAP00813 363 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 MYF6P23409 242 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 SOX3P41225 446 aa18.96■□□□□ 0.63
SMCO4-201ENST00000298966 DAPP51397 102 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms