RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 RCBTB1Q8NDN9 531 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 STOML3Q8TAV4 291 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 TMEM239Q8WW34 195 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 PDXPQ96GD0 296 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 C7orf50Q9BRJ6 194 aaKnown RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 CDCA4Q9BXL8 241 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 NTNG1Q9Y2I2 539 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 ACACAQ13085 2346 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 DCDC2BA2VCK2 349 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 SLC2A10O95528 541 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 INHBBP09529 407 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ACTC1P68032 377 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ACTA1P68133 377 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 MAT1AQ00266 395 aaKnown RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 ULK3Q6PHR2 472 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ZER1Q7Z7L7 766 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 OR13C2Q8NGS9 318 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 EDEM2Q9BV94 578 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 H0YGG7 62 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 VNN2O95498 520 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 SFTPBP07988 381 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 HCKP08631 526 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 CCR2P41597 374 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ARF3P61204 181 aaPredicted RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 FBXO42Q6P3S6 717 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 GCDHQ92947 438 aaPredicted RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 OR2M2Q96R28 347 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 SERINC2Q96SA4 455 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 PDFQ9HBH1 243 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 FGF22Q9HCT0 170 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ANKRD61A6NGH8 418 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 F8W036 122 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ITGB8P26012 769 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 GDF1P27539 372 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 PRDX1Q06830 199 aaKnown RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 DLX2Q07687 328 aaPredicted RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 ZNF362Q5T0B9 420 aaPredicted RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 C8orf82Q6P1X6 216 aaPredicted RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 PRICKLE2Q7Z3G6 844 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 BPIFA2Q96DR5 249 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 MICU1Q9BPX6 476 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 GABARAPL3Q9BY60 117 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ZNF436Q9C0F3 470 aaPredicted RBP12.48□□□□□ -0.41
HPS3-201ENST00000296051 SYT4Q9H2B2 425 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 R4GN57 208 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 MCM3APO60318 1980 aa12.48□□□□□ -0.41
HPS3-201ENST00000296051 ZAR1LA6NP61 321 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 NPPBP16860 134 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 OR1D5P58170 312 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 FOXC1Q12948 553 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 GPR18Q14330 331 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 SMAD2Q15796 467 aaKnown RBP12.47□□□□□ -0.41
HPS3-201ENST00000296051 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 TBC1D20Q96BZ9 403 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 RPP25Q9BUL9 199 aaKnown RBP12.47□□□□□ -0.41
HPS3-201ENST00000296051 ASB4Q9Y574 426 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 M6PRP20645 277 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 LEG1Q6P5S2 330 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 CD300LFQ8TDQ1 290 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 UBTD2Q8WUN7 234 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 SEC22AQ96IW7 307 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 ZNF559Q9BR84 538 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 POTEKPQ9BYX7 375 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 MTHFD2LQ9H903 347 aaPredicted RBP12.47□□□□□ -0.41
HPS3-201ENST00000296051 DOCK5Q9H7D0 1870 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 ZNFX1Q9P2E3 1918 aaKnown RBP12.47□□□□□ -0.41
HPS3-201ENST00000296051 SORDQ00796 357 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 RBPJQ06330 500 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 NKAIN4Q8IVV8 208 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 ZNF680Q8NEM1 530 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 LGALS14Q8TCE9 139 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 HAVCR1Q96D42 359 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 GABARAPL1Q9H0R8 117 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 PLEKHM1Q9Y4G2 1056 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 RTTNQ86VV8 2226 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 METTL21EPA6NDL7 271 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 G3V3Y1 287 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 TOR1AO14656 332 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 SC5DO75845 299 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 ZNF43P17038 809 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 PRLHRP49683 370 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 EPHA4P54764 986 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 ADPRHP54922 357 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 TSPAN31Q12999 210 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 TRAM1Q15629 374 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 LTB4RQ15722 352 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 DUSP19Q8WTR2 217 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 TMEM255BQ8WV15 326 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 MRGPRX1Q96LB2 322 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 CHST2Q9Y4C5 530 aa12.47□□□□□ -0.41
HPS3-201ENST00000296051 TRBV11-1A0A0K0K1C0 115 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 ZNF878C9JN71 531 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 MAPK3P27361 379 aaPredicted RBP12.46□□□□□ -0.41
HPS3-201ENST00000296051 HLA-DMAP28067 261 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 MMP12P39900 470 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms