RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SNTA1Q13424 505 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 INPP5JQ15735 1006 aaPredicted RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 ZNF362Q5T0B9 420 aaPredicted RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 PRAMEF20Q5VT98 475 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 C1QL3Q5VWW1 255 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 DND1Q8IYX4 353 aaKnown RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 C9orf43Q8TAL5 461 aaPredicted RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 RFKQ969G6 155 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 NKD1Q969G9 470 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 OTULINQ96BN8 352 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 RNFT2Q96EX2 444 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 ERMAPQ96PL5 475 aaPredicted RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 MRPS18AQ9NVS2 196 aaKnown RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 VDAC3Q9Y277 283 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 PTPRBP23467 1997 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 TRAV36DV7A0A075B6V5 113 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 MTNR1AP48039 350 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 PRPS1P60891 318 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 ATP1A4Q13733 1029 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 H3F3CQ6NXT2 135 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 PLBD1Q6P4A8 553 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 ARHGAP11AQ6P4F7 1023 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 RAB43Q86YS6 212 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 OR52I1Q8NGK6 324 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 MOSPD2Q8NHP6 518 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 ZNF420Q8TAQ5 688 aaPredicted RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 SECISBP2Q96T21 854 aaKnown RBP20.72■□□□□ 0.91
PTX3-201ENST00000295927 CHRNA9Q9UGM1 479 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 IL17BQ9UHF5 180 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 HIF3AQ9Y2N7 669 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 A8MVM7 634 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 BLOC1S5-TXNDC5H3BN57 136 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 PTHP01270 115 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 ADORA3P0DMS8 318 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 HK1P19367 917 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 NOS3P29474 1203 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 RPL4P36578 427 aaKnown RBP20.71■□□□□ 0.91
PTX3-201ENST00000295927 DLX5P56178 289 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 KLHL22Q53GT1 634 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 TMEM81Q6P7N7 255 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 DPY19L2P2Q6ZN68 376 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 SIRT6Q8N6T7 355 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 LGALS12Q96DT0 336 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 DNAJA3Q96EY1 480 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 MED20Q9H944 212 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 FKRPQ9H9S5 495 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 H2AFY2Q9P0M6 372 aaPredicted RBP20.71■□□□□ 0.91
PTX3-201ENST00000295927 ZNF229Q9UJW7 825 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 IER3IP1Q9Y5U9 82 aa20.71■□□□□ 0.91
PTX3-201ENST00000295927 RIIAD1A6NNX1 92 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 ZNF701M0R085 212 aaPredicted RBP20.7■□□□□ 0.91
PTX3-201ENST00000295927 TM4SF5O14894 197 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 NPIPB7O75200 414 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 BGLAPP02818 100 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 AQP2P41181 271 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 B3GNTL1Q67FW5 361 aaPredicted RBP20.7■□□□□ 0.91
PTX3-201ENST00000295927 IL22RA1Q8N6P7 574 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 OR2M3Q8NG83 312 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 ADAMTS17Q8TE56 1095 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 CRELD1Q96HD1 420 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 FRMD6Q96NE9 622 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 PTDSS2Q9BVG9 487 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 SH2D2AQ9NP31 389 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 HPF1Q9NWY4 346 aa20.7■□□□□ 0.91
PTX3-201ENST00000295927 DOCK10Q96BY6 2186 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 ZFHX2Q9C0A1 2572 aaPredicted RBP20.7■□□□□ 0.9
PTX3-201ENST00000295927 TRMUO75648 421 aaKnown RBP20.7■□□□□ 0.9
PTX3-201ENST00000295927 CCL3P10147 92 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 RBMS1P29558 406 aaKnown RBP20.7■□□□□ 0.9
PTX3-201ENST00000295927 HTR1FP30939 366 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 ZNF41P51814 821 aaPredicted RBP20.7■□□□□ 0.9
PTX3-201ENST00000295927 RAB40BQ12829 278 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 ZNF468Q5VIY5 522 aaPredicted RBP20.7■□□□□ 0.9
PTX3-201ENST00000295927 WDSUB1Q8N9V3 476 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 STK35Q8TDR2 534 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 PAQR8Q8TEZ7 354 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 C12orf43Q96C57 262 aaKnown RBP20.7■□□□□ 0.9
PTX3-201ENST00000295927 DOK1Q99704 481 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 FUNDC2Q9BWH2 189 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 HCAR1Q9BXC0 346 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 NRIP3Q9NQ35 241 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 FBXL2Q9UKC9 423 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 ADAM18Q9Y3Q7 739 aa20.7■□□□□ 0.9
PTX3-201ENST00000295927 CDRT15L2A8MXV6 281 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 PRR23D1E9PI22 279 aaPredicted RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 ETV2O00321 342 aaPredicted RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 APOL3O95236 402 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 RAB36O95755 333 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 PRR23D2P0DMB1 279 aaPredicted RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 CEACAM1P13688 526 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 ZNF3P17036 446 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 GSTT1P30711 240 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 UQCRC1P31930 480 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 APOBEC1P41238 236 aaKnown RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 FOXF1Q12946 379 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 ITGADQ13349 1161 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 CRMP1Q14194 572 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 C1orf140Q5VVS0 124 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 GID4Q8IVV7 300 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms