RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 L7N2F9 121 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 HOXC11O43248 304 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 ALOX12BO75342 701 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PRH1P02810 166 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MSX1P28360 303 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 TACR3P29371 465 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 RIDAP52758 137 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 GNG2P59768 71 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PDE7AQ13946 482 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GBX1Q14549 363 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 TBCEQ15813 527 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 SAXO2Q658L1 398 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PM20D2Q8IYS1 436 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SHDQ96IW2 340 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 Q96M85 177 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 RNF32Q9H0A6 362 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CDCP1Q9H5V8 836 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 B3GNT3Q9Y2A9 372 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MRPS2Q9Y399 296 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 PTRH2Q9Y3E5 179 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 SLC16A6O15403 523 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 LILRB3O75022 631 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 RBBP9O75884 186 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PRR35P0CG20 571 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PNMTP11086 282 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 COL9A1P20849 921 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PITPNBP48739 271 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 POU3F1Q03052 451 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 RUNX2Q13950 521 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MLF2Q15773 248 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 MEP1BQ16820 701 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 WDR45BQ5MNZ6 344 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 KIAA0895LQ68EN5 471 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 AWAT2Q6E213 333 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ZNF322Q6U7Q0 402 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 LYPD4Q6UWN0 246 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 KANSL1Q7Z3B3 1105 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 RBP7Q96R05 134 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 C1QTNF3Q9BXJ4 246 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SYT4Q9H2B2 425 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 HHATLQ9HCP6 504 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 C1GALT1Q9NS00 363 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 VSTM2BA6NLU5 285 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 OR5K4A6NMS3 321 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ARPC1BO15143 372 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 SSX4O60224 188 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GABARAPO95166 117 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CPNE6O95741 557 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 E2F1Q01094 437 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SLC6A19Q695T7 634 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 XAF1Q6GPH4 301 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MFSD12Q6NUT3 480 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 LRRC69Q6ZNQ3 347 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 USP51Q70EK9 711 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 NDUFAF7Q7L592 441 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ASCC1Q8N9N2 400 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 OR2A1Q8NGT9 310 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PHOSPHO2Q8TCD6 241 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 DEDD2Q8WXF8 326 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ZNF486Q96H40 463 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 LYSMD1Q96S90 227 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SGPP1Q9BX95 441 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 A4GALTQ9NPC4 353 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 C12orf4Q9NQ89 552 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ASB6Q9NWX5 421 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 HPF1Q9NWY4 346 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SIDT1Q9NXL6 827 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 OSGIN1Q9UJX0 560 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 NDRG4Q9ULP0 352 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 KIF26BQ2KJY2 2108 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GRXCR2A6NFK2 248 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 C2CD4DB7Z1M9 353 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 UPK1AO00322 258 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SULT1C4O75897 302 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SPDEFO95238 335 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 CYB5AP00167 134 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TRHRP34981 398 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 FOXK2Q01167 660 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SMCO1Q147U7 214 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 DUSP6Q16828 381 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TMEM52BQ4KMG9 183 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ABCA11PQ4W5N1 156 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ATAD3CQ5T2N8 411 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 QSOX2Q6ZRP7 698 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SLC46A3Q7Z3Q1 461 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 IL22RA1Q8N6P7 574 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 PLPP7Q8NBV4 271 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SLC35B4Q969S0 331 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SPACA5Q96QH8 159 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 OR11A1Q9GZK7 315 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 CST11Q9H112 138 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 C8orf33Q9H7E9 229 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 ACSS1Q9NUB1 689 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 KLHL42Q9P2K6 505 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 B3GALT1Q9Y5Z6 326 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 RALGAPA1Q6GYQ0 2036 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TRIM64CA6NLI5 447 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ARPC5O15511 151 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ALDOBP05062 364 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms