RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CDONQ4KMG0 1287 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 C17orf82Q86X59 251 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 TOMM5Q8N4H5 51 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 CLDN23Q96B33 292 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 SPACA7Q96KW9 195 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 ART5Q96L15 291 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 MCHR1Q99705 422 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 SPRTNQ9H040 489 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 UBQLN3Q9H347 655 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 LRIT1Q9P2V4 623 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 SIT1Q9Y3P8 196 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 A0A0G2JK05 382 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 GXYLT2A0PJZ3 443 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 DUXAA6NLW8 204 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 PLPP2O43688 288 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 GABRA4P48169 554 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 SRP9P49458 86 aaKnown RBP16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 PUS10Q3MIT2 529 aaKnown RBP16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 AMZ1Q400G9 498 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 C14orf28Q4W4Y0 310 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 PRAMEF17Q5VTA0 474 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 GPR139Q6DWJ6 353 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 PLBD1Q6P4A8 553 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 LYPD4Q6UWN0 246 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 GPALPP1Q8IXQ4 340 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 BRIX1Q8TDN6 353 aaKnown RBP16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 TMEM255BQ8WV15 326 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 OMA1Q96E52 524 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 TCTN2Q96GX1 697 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 C7orf50Q9BRJ6 194 aaKnown RBP16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 KCNE5Q9UJ90 142 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 SEC16AO15027 2179 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 CFAP54Q96N23 3096 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 RP1P56715 2156 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 DAPL1A0PJW8 107 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 LILRA5A6NI73 299 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 FAM183AA6NL82 134 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 PEX12O00623 359 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 BCAT2O15382 392 aaPredicted RBP16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 PIP5K1CO60331 668 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 MT-ND5P03915 603 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 THY1P04216 161 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 CXCL3P19876 107 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 TAS2R43P59537 309 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 PITPNAQ00169 270 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 CLLU1Q5K131 121 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 ZAR1Q86SH2 424 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 DTX3Q8N9I9 347 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 RADILQ96JH8 1075 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 CLEC4MQ9H2X3 399 aaPredicted RBP16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 IL20RAQ9UHF4 553 aa16.83■□□□□ 0.28
PDLIM3-201ENST00000284767 MEIKINA0A087WXM9 373 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 RHPN2P1A8MT19 583 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 OR10H2O60403 315 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 UBL3O95164 117 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 PDGFBP01127 241 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 PRKACBP22694 351 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 OR10A3P58181 314 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 SNTA1Q13424 505 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 ARHGAP11BQ3KRB8 267 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 ARL9Q6T311 187 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 ZNF836Q6ZNA1 936 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 FGD2Q7Z6J4 655 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 GLRX5Q86SX6 157 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 CDH24Q86UP0 819 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC25A45Q8N413 288 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 TMEM99Q8N816 258 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 OR52R1Q8NGF1 315 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 YIPF5Q969M3 257 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 NDC1Q9BTX1 674 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 ZNF443Q9Y2A4 671 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 TP53BP1Q12888 1972 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 CBX7O95931 251 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 SULT1A3P0DMM9 295 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 SULT1A4P0DMN0 295 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 MAOAP21397 527 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 MMP15P51511 669 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 DCST2Q5T1A1 773 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 PXKQ7Z7A4 578 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 DEFB123Q8N688 67 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 MMABQ96EY8 250 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 CACNG6Q9BXT2 260 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 ZNF275Q9NSD4 429 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 DTX4Q9Y2E6 619 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 NPFFR2Q9Y5X5 522 aa16.82■□□□□ 0.28
PDLIM3-201ENST00000284767 WDFY3Q8IZQ1 3526 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 A0A1B0GVC2 190 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 A6NIN4 97 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 CDC42EP2O14613 210 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 GIFP27352 417 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 GABRA3P34903 492 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 FNTBP49356 437 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 CFHR1Q03591 330 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 GSG1Q2KHT4 349 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 CEACAM19Q7Z692 300 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 COX18Q8N8Q8 333 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 TEX19Q8NA77 164 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 OR4N2Q8NGD1 307 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 ABHD4Q8TB40 342 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms