RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 C3P1Q6ZMU1 363 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 ZNF740Q8NDX6 193 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 ASB13Q8WXK3 278 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 FAM46AQ96IP4 442 aaKnown RBP9.52□□□□□ -0.89
UPF3B-201ENST00000276201 IFT27Q9BW83 186 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 SORBS1Q9BX66 1292 aaKnown RBP9.52□□□□□ -0.89
UPF3B-201ENST00000276201 HAO2Q9NYQ3 351 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 SPATA2Q9UM82 520 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 DNMT3AQ9Y6K1 912 aaPredicted RBP9.52□□□□□ -0.89
UPF3B-201ENST00000276201 LOC105369274A0A096LPK9 316 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 LY6G6EA0A0G2JKS1 128 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 OR2M5A3KFT3 312 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 GSAPA4D1B5 854 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 HMSDA8MTL9 139 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SNRPGP15A8MWD9 76 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 DKK1O94907 266 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 TNFP01375 233 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 RAB3BP20337 219 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 CCR9P51686 369 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 AP3S2P59780 193 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 FOXD4Q12950 439 aaPredicted RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 INSL4Q14641 139 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 RRM2BQ7LG56 351 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 KRT74Q7RTS7 529 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 OVCH1Q7RTY7 1134 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 C17orf64Q86WR6 236 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 OR4N4Q8N0Y3 316 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SLC43A2Q8N370 569 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 FTMTQ8N4E7 242 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 OR51Q1Q8NH59 317 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 RAD51AP1Q96B01 352 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SCARF2Q96GP6 870 aaPredicted RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 NDC1Q9BTX1 674 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 C20orf85Q9H1P6 137 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 ISG20L2Q9H9L3 353 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SLC35C2Q9NQQ7 365 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 GPR34Q9UPC5 381 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 U3KQA8 63 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SLC22A31A6NKX4 558 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SOCS6O14544 535 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 PGRMC2O15173 223 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 OGG1O15527 345 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 NDUFS4O43181 175 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SSNA1O43805 119 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 GATBO75879 557 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 FGF2P09038 288 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 MYF5P13349 255 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 CTSEP14091 401 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 IFNGR1P15260 489 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 PAICSP22234 425 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 MAPK3P27361 379 aaPredicted RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 NTSP30990 170 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 MAP2K6P52564 334 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 MRPS10P82664 201 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 DGCR2P98153 550 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 SNTB2Q13425 540 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 ELOCQ15369 112 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 TMEM35AQ53FP2 167 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 CPOQ8IVL8 374 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 RNF113BQ8IZP6 322 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 OR2T35Q8NGX2 323 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 ST8SIA4Q92187 359 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 KAT2AQ92830 837 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 KISS1RQ969F8 398 aaPredicted RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 EXOSC8Q96B26 276 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 PGLYRP3Q96LB9 341 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 MRI1Q9BV20 369 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 RBCK1Q9BYM8 510 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 UBQLN3Q9H347 655 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 ZCCHC3Q9NUD5 404 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 PIPOXQ9P0Z9 390 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 TRPC4Q9UBN4 977 aa9.51□□□□□ -0.89
UPF3B-201ENST00000276201 GOLGA4Q13439 2230 aaKnown RBP9.51□□□□□ -0.89
UPF3B-201ENST00000276201 ATP6V1G2-DDX39BF2Z307 99 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 TMPRSS11DO60235 418 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CLEC3AO75596 197 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 RGS11O94810 467 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 PSMB1P20618 241 aaKnown RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 ATP6V1E1P36543 226 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 BUD31P41223 144 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 SRP9P49458 86 aaKnown RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 ACTC1P68032 377 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 ACTA1P68133 377 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 MEF2AQ02078 507 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CRYZQ08257 329 aaKnown RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 KRT33BQ14525 404 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 UBE2NLQ5JXB2 153 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CEACAM19Q7Z692 300 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 UBE3DQ7Z6J8 389 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 LNX2Q8N448 690 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 BBS1Q8NFJ9 593 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 OR6C4Q8NGE1 309 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 OR52H1Q8NGJ2 320 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CCL4L1Q8NHW4 92 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 SCARB1Q8WTV0 552 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 FCRL4Q96PJ5 515 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 F2RL3Q96RI0 385 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 DUSP23Q9BVJ7 150 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 ABCG4Q9H172 646 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms