RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 GPR107Q5VW38 600 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 C5orf46Q6UWT4 87 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 ZNF367Q7RTV3 350 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 SLC46A3Q7Z3Q1 461 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 GID4Q8IVV7 300 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 OR11G2Q8NGC1 345 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 GPR119Q8TDV5 335 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 ST8SIA1Q92185 356 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 SH3YL1Q96HL8 342 aaPredicted RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 GPX7Q96SL4 187 aaPredicted RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 SECISBP2Q96T21 854 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 LIN28AQ9H9Z2 209 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 MCCC2Q9HCC0 563 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 WDR70Q9NW82 654 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 RALYQ9UKM9 306 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 TCFL5Q9UL49 500 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 DIMT1Q9UNQ2 313 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 ANKUB1A6NFN9 424 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 C21orf140B9A014 251 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 H3BMQ9 156 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 ETV2O00321 342 aaPredicted RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 SCO2O43819 266 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 PEPDP12955 493 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 ICAM2P13598 275 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 PTNP21246 168 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 TACR3P29371 465 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 CXADRP78310 365 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 SSPNQ14714 243 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 ARMC4Q5T2S8 1044 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 ARHGAP11AQ6P4F7 1023 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 THSD4Q6ZMP0 1018 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 CCDC81Q6ZN84 652 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 GRINAQ7Z429 371 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 ERI1Q8IV48 349 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 CT55Q8WUE5 264 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 TMEM234Q8WY98 164 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 C12orf43Q96C57 262 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 NMD3Q96D46 503 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 SPACA9Q96E40 222 aaPredicted RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 COG8Q96MW5 612 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 RASL10BQ96S79 203 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 GPN2Q9H9Y4 310 aaPredicted RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 CPNE5Q9HCH3 593 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 FGF20Q9NP95 211 aaPredicted RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 TAS2R10Q9NYW0 307 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 WARS2Q9UGM6 360 aaKnown RBP13.97□□□□□ -0.17
COPS3-201ENST00000268717 ENPP5Q9UJA9 477 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 HEATR5AQ86XA9 2040 aa13.97□□□□□ -0.17
COPS3-201ENST00000268717 CACNA1GO43497 2377 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 TRAV27A0A087WT01 109 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 NSG1A0A0A6YYJ2 146 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 OR2J2O76002 312 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 ADORA3P0DMS8 318 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 FUT1P19526 365 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 PSMB9P28065 219 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 HTR1FP30939 366 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 MTNR1AP48039 350 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 POLR2HP52434 150 aaKnown RBP13.96□□□□□ -0.17
COPS3-201ENST00000268717 SNTA1Q13424 505 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 ZNF74Q16587 644 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 C16orf47Q6ZP98 133 aaPredicted RBP13.96□□□□□ -0.17
COPS3-201ENST00000268717 TIPARPQ7Z3E1 657 aaKnown RBP13.96□□□□□ -0.17
COPS3-201ENST00000268717 THAP3Q8WTV1 239 aaPredicted RBP13.96□□□□□ -0.17
COPS3-201ENST00000268717 YIPF6Q96EC8 236 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 TNFRSF13CQ96RJ3 184 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 IFT27Q9BW83 186 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 FUNDC2Q9BWH2 189 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 GPR87Q9BY21 358 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 NDEL1Q9GZM8 345 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 SDHAF3Q9NRP4 125 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 FARSAQ9Y285 508 aaKnown RBP13.96□□□□□ -0.17
COPS3-201ENST00000268717 HIF3AQ9Y2N7 669 aa13.96□□□□□ -0.17
COPS3-201ENST00000268717 YARS2Q9Y2Z4 477 aaKnown RBP13.96□□□□□ -0.17
COPS3-201ENST00000268717 TP53I11O14683 189 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 ARPC3O15145 178 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 IDH3BO43837 385 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 MAN1A2O60476 641 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 GABARAPO95166 117 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 RAB36O95755 333 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 IFNGP01579 166 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 TSPAN19P0C672 248 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 APEHP13798 732 aaKnown RBP13.95□□□□□ -0.18
COPS3-201ENST00000268717 TCN2P20062 427 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 CXCR1P25024 350 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 MAP2K6P52564 334 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 CDH11P55287 796 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 RPS15P62841 145 aaKnown RBP13.95□□□□□ -0.18
COPS3-201ENST00000268717 EGR4Q05215 589 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 QPRTQ15274 297 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 ZNF791Q3KP31 576 aaPredicted RBP13.95□□□□□ -0.18
COPS3-201ENST00000268717 OPN5Q6U736 354 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 DPY19L2P2Q6ZN68 376 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 PPP1R32Q7Z5V6 425 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 PROKR2Q8NFJ6 384 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 OR6S1Q8NH40 331 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 OR51A7Q8NH64 312 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 STK35Q8TDR2 534 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 DUSP19Q8WTR2 217 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 SNRNP27Q8WVK2 155 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms