RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PPP1R3DO95685 299 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 BGLAPP02818 100 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 CEACAM1P13688 526 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 PRPS1P60891 318 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 ARHGAP11AQ6P4F7 1023 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 CCDC81Q6ZN84 652 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 DTX1Q86Y01 620 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 MARCH9Q86YJ5 346 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 FADS6Q8N9I5 356 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 LRRC75AQ8NAA5 344 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 OR2M3Q8NG83 312 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 PAQR8Q8TEZ7 354 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 RFKQ969G6 155 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 CRELD1Q96HD1 420 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 TMEM80Q96HE8 168 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 PTDSS2Q9BVG9 487 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 ANGPTL4Q9BY76 406 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 FKRPQ9H9S5 495 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 FGF20Q9NP95 211 aaPredicted RBP14.84□□□□□ -0.03
TPM1-201ENST00000267996 NANSQ9NR45 359 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 ZNF229Q9UJW7 825 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 CUL9Q8IWT3 2517 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 IRGMA1A4Y4 181 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 ZC3H12DA2A288 527 aaKnown RBP14.84□□□□□ -0.03
TPM1-201ENST00000267996 A8MVM7 634 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 MCIDASD6RGH6 385 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 ARPC3O15145 178 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 LCKP06239 509 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 CCNA2P20248 432 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 HTR1FP30939 366 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 UQCRC1P31930 480 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 KLHL22Q53GT1 634 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 SLC35F1Q5T1Q4 408 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 GPR107Q5VW38 600 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 IGF2-ASQ6U949 168 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 C5orf46Q6UWT4 87 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 ARSKQ6UWY0 536 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 CXXC5Q7LFL8 322 aaKnown RBP14.84□□□□□ -0.03
TPM1-201ENST00000267996 CPOQ8IVL8 374 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 WDSUB1Q8N9V3 476 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 OR52I1Q8NGK6 324 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 OR6S1Q8NH40 331 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 PSMF1Q92530 271 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 ISOC1Q96CN7 298 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 LGALS12Q96DT0 336 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 TAPBPLQ9BX59 468 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 PROK2Q9HC23 129 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 NRIP3Q9NQ35 241 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 DIMT1Q9UNQ2 313 aaKnown RBP14.84□□□□□ -0.03
TPM1-201ENST00000267996 MRPS18BQ9Y676 258 aaKnown RBP14.84□□□□□ -0.03
TPM1-201ENST00000267996 ZFHX2Q9C0A1 2572 aaPredicted RBP14.83□□□□□ -0.04
TPM1-201ENST00000267996 IDH3BO43837 385 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 SLC25A12O75746 678 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 MT-ATP6P00846 226 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 ADORA3P0DMS8 318 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 APEHP13798 732 aaKnown RBP14.83□□□□□ -0.04
TPM1-201ENST00000267996 HK1P19367 917 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 APOBEC1P41238 236 aaKnown RBP14.83□□□□□ -0.04
TPM1-201ENST00000267996 MTNR1AP48039 350 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 TMBIM6P55061 237 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 CDH11P55287 796 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 RAB40BQ12829 278 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 ITGADQ13349 1161 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 ATP1A4Q13733 1029 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 PLPPR5Q32ZL2 321 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 C1QL3Q5VWW1 255 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 JMJD6Q6NYC1 403 aaPredicted RBP14.83□□□□□ -0.04
TPM1-201ENST00000267996 GID4Q8IVV7 300 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 ALDH16A1Q8IZ83 802 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 TMEM156Q8N614 296 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 C10orf53Q8N6V4 93 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 BBS1Q8NFJ9 593 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 MOSPD2Q8NHP6 518 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 RNFT2Q96EX2 444 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 SGCZQ96LD1 299 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 IP6K3Q96PC2 410 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 NPAS1Q99742 590 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 IL17BQ9UHF5 180 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 COMMD3-BMI1R4GMX3 469 aa14.83□□□□□ -0.04
TPM1-201ENST00000267996 GVINP1Q7Z2Y8 2422 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 ANKRD33BA6NCL7 494 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 TRIM64BA6NI03 449 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 RIIAD1A6NNX1 92 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 TRMUO75648 421 aaKnown RBP14.82□□□□□ -0.04
TPM1-201ENST00000267996 PTHP01270 115 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 CCL3P10147 92 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 RBMS1P29558 406 aaKnown RBP14.82□□□□□ -0.04
TPM1-201ENST00000267996 RPS5P46782 204 aaKnown RBP14.82□□□□□ -0.04
TPM1-201ENST00000267996 ST13P50502 369 aaKnown RBP14.82□□□□□ -0.04
TPM1-201ENST00000267996 MAP2K6P52564 334 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 ZNF468Q5VIY5 522 aaPredicted RBP14.82□□□□□ -0.04
TPM1-201ENST00000267996 C1orf140Q5VVS0 124 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 NIPAL3Q6P499 406 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 PLBD1Q6P4A8 553 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 POMZP3Q6PJE2 187 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 ADAMTS14Q8WXS8 1223 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 PTP4A1Q93096 173 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 NMD3Q96D46 503 aaKnown RBP14.82□□□□□ -0.04
TPM1-201ENST00000267996 YIPF6Q96EC8 236 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 MRGPRX4Q96LA9 322 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms