RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 RASGEF1BQ0VAM2 473 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 C1orf140Q5VVS0 124 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 KLHL15Q96M94 604 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 LAT2Q9GZY6 243 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 CTSBP07858 339 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 GABREP78334 506 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 SEC23BQ15437 767 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 GLYR1Q49A26 553 aaPredicted RBP13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 FAM69AQ5T7M9 428 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 SPRYD4Q8WW59 207 aaPredicted RBP13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 TM9SF4Q92544 642 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 HTRA1Q92743 480 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 ACOT13Q9NPJ3 140 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 CES1P1Q9UKY3 287 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 MAPK3P27361 379 aaPredicted RBP13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 FOXL2P58012 376 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 PLP2Q04941 152 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 ANKRD37Q7Z713 158 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 ALDH16A1Q8IZ83 802 aa13.27□□□□□ -0.28
PDLIM2-201ENST00000265810 ARHGEF17Q96PE2 2063 aaPredicted RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 SAGE2PA6NJ88 616 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 LRRN3E7EW58 273 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 STMND1H3BQB6 276 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 J3QRK9 145 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 K7ESF4 209 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 FOXD2O60548 495 aaPredicted RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 MRPS14O60783 128 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 OR7A10O76100 309 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 EIF1P41567 113 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 MAGEA2P43356 314 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 PCBP3P57721 371 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 OR2G6Q5TZ20 316 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 ACSM5Q6NUN0 579 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 KIRREL2Q6UWL6 708 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 C5orf46Q6UWT4 87 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 SNIP1Q8TAD8 396 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC41A2Q96JW4 573 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 MCTS1Q9ULC4 181 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 A4GNTQ9UNA3 340 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 C4orf51C9J302 202 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 RAD1O60671 282 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 LRRC69Q6ZNQ3 347 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 SIMC1Q8NDZ2 872 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 Q96M85 177 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF582Q96NG8 517 aaPredicted RBP13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 INTS14Q96SY0 518 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 OR11A1Q9GZK7 315 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC52A3Q9NQ40 469 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 MED17Q9NVC6 651 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 STUB1Q9UNE7 303 aa13.27□□□□□ -0.29
PDLIM2-201ENST00000265810 SOCS6O14544 535 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 CD14P08571 375 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 RBM34P42696 430 aaKnown RBP13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 RPS18P62269 152 aaKnown RBP13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 CHAF1BQ13112 559 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 HSD17B12Q53GQ0 312 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF501Q96CX3 271 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 SEMA4CQ9C0C4 833 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 GABARAPL1Q9H0R8 117 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 TAS2R16Q9NYV7 291 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 PSORS1C1Q9UIG5 152 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 PNLIPP16233 465 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 TBC1D25Q3MII6 688 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 VASNQ6EMK4 673 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 GALNT15Q8N3T1 639 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC37A3Q8NCC5 494 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 LRFN1Q9P244 771 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 CHRNA9Q9UGM1 479 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 NDRG4Q9ULP0 352 aaKnown RBP13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 TCF20Q9UGU0 1960 aaKnown RBP13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 ANAPC1Q9H1A4 1944 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 CCDC182A6NF36 153 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 A6NHS1 94 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 KDM4EB2RXH2 506 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 CSF2RBP32927 897 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 CSNK1A1P48729 337 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 MELKQ14680 651 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 C11orf88Q6PI97 169 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 B3GNT4Q9C0J1 378 aa13.26□□□□□ -0.29
PDLIM2-201ENST00000265810 FAM240BA0A1B0GVZ2 78 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 CENPBD1B2RD01 187 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 GRK5P34947 590 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 EIF2B1Q14232 305 aaKnown RBP13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 ANKDD1AQ495B1 522 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 NDUFAF7Q7L592 441 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 FN3KQ9H479 309 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 NKIRAS2Q9NYR9 191 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 CORINQ9Y5Q5 1042 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 PCM1Q15154 2024 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 PSMB10P40306 273 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 DPY19L2P2Q6ZN68 376 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 YRDCQ86U90 279 aaKnown RBP13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF101Q8IZC7 436 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 MS4A15Q8N5U1 240 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 OR5J2Q8NH18 312 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 C1orf216Q8TAB5 229 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 RASD2Q96D21 266 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms