RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 KCMF1Q9P0J7 381 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 NPFFR2Q9Y5X5 522 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 GRXCR1A8MXD5 290 aa15.08■□□□□ 0
GPC1-201ENST00000264039 OR6A2O95222 327 aa15.08■□□□□ 0
GPC1-201ENST00000264039 TXNDC12O95881 172 aa15.08■□□□□ 0
GPC1-201ENST00000264039 CD160O95971 181 aa15.08■□□□□ 0
GPC1-201ENST00000264039 CPT2P23786 658 aa15.08■□□□□ 0
GPC1-201ENST00000264039 BDKRB2P30411 391 aa15.08■□□□□ 0
GPC1-201ENST00000264039 AGERQ15109 404 aa15.08■□□□□ 0
GPC1-201ENST00000264039 LTB4RQ15722 352 aa15.08■□□□□ 0
GPC1-201ENST00000264039 UBE2NLQ5JXB2 153 aa15.08■□□□□ 0
GPC1-201ENST00000264039 TFAP2EQ6VUC0 442 aa15.08■□□□□ 0
GPC1-201ENST00000264039 OVCH2Q7RTZ1 564 aa15.08■□□□□ 0
GPC1-201ENST00000264039 TM4SF18Q96CE8 201 aa15.08■□□□□ 0
GPC1-201ENST00000264039 CTSFQ9UBX1 484 aa15.08■□□□□ 0
GPC1-201ENST00000264039 GPN3Q9UHW5 284 aaPredicted RBP15.08■□□□□ 0
GPC1-201ENST00000264039 PURGQ9UJV8 347 aaKnown RBP15.08■□□□□ 0
GPC1-201ENST00000264039 CYB5AP00167 134 aa15.08■□□□□ 0
GPC1-201ENST00000264039 SBK2P0C263 348 aa15.08■□□□□ 0
GPC1-201ENST00000264039 SRMP19623 302 aa15.08■□□□□ 0
GPC1-201ENST00000264039 PRSS3P35030 304 aa15.08■□□□□ 0
GPC1-201ENST00000264039 OPRD1P41143 372 aa15.08■□□□□ 0
GPC1-201ENST00000264039 SIRPAP78324 504 aa15.08■□□□□ 0
GPC1-201ENST00000264039 PCSK9Q8NBP7 692 aaKnown RBP15.08■□□□□ 0
GPC1-201ENST00000264039 OR1S1Q8NH92 325 aa15.08■□□□□ 0
GPC1-201ENST00000264039 ULBP3Q9BZM4 244 aa15.08■□□□□ 0
GPC1-201ENST00000264039 FZD3Q9NPG1 666 aa15.08■□□□□ 0
GPC1-201ENST00000264039 ZNF230Q9UIE0 474 aaPredicted RBP15.08■□□□□ 0
GPC1-201ENST00000264039 DICER1Q9UPY3 1922 aaKnown RBP15.08■□□□□ 0
GPC1-201ENST00000264039 SCN3AQ9NY46 2000 aa15.08■□□□□ 0
GPC1-201ENST00000264039 DNASE2O00115 360 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 SULT1C2O00338 296 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TMPRSS11DO60235 418 aa15.07■□□□□ 0
GPC1-201ENST00000264039 RECKO95980 971 aa15.07■□□□□ 0
GPC1-201ENST00000264039 OR8G3PP0DMU2 310 aa15.07■□□□□ 0
GPC1-201ENST00000264039 EIF2S3LQ2VIR3 472 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 HFEQ30201 348 aa15.07■□□□□ 0
GPC1-201ENST00000264039 CLLU1OSQ5K130 101 aa15.07■□□□□ 0
GPC1-201ENST00000264039 EOGTQ5NDL2 527 aa15.07■□□□□ 0
GPC1-201ENST00000264039 HACD4Q5VWC8 232 aa15.07■□□□□ 0
GPC1-201ENST00000264039 ZNF585AQ6P3V2 769 aa15.07■□□□□ 0
GPC1-201ENST00000264039 HSD17B13Q7Z5P4 300 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 TAS2R5Q9NYW4 299 aa15.07■□□□□ 0
GPC1-201ENST00000264039 CALML5Q9NZT1 146 aa15.07■□□□□ 0
GPC1-201ENST00000264039 IER3IP1Q9Y5U9 82 aa15.07■□□□□ 0
GPC1-201ENST00000264039 H3BNC9 293 aa15.07■□□□□ 0
GPC1-201ENST00000264039 GABARAPH6UMI1 98 aa15.07■□□□□ 0
GPC1-201ENST00000264039 CDC42EP2O14613 210 aa15.07■□□□□ 0
GPC1-201ENST00000264039 FOSL2P15408 326 aa15.07■□□□□ 0
GPC1-201ENST00000264039 HOXB9P17482 250 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 PRPH2P23942 346 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TRHRP34981 398 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 RBM34P42696 430 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 RPS27AP62979 156 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 UBA52P62987 128 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 BTN3A2P78410 334 aa15.07■□□□□ 0
GPC1-201ENST00000264039 FOXK2Q01167 660 aa15.07■□□□□ 0
GPC1-201ENST00000264039 ZNF616Q08AN1 781 aa15.07■□□□□ 0
GPC1-201ENST00000264039 ELAVL2Q12926 359 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 TRAM1Q15629 374 aa15.07■□□□□ 0
GPC1-201ENST00000264039 EXOSC6Q5RKV6 272 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 ARHGAP40Q5TG30 622 aa15.07■□□□□ 0
GPC1-201ENST00000264039 FAM83HQ6ZRV2 1179 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 GDF7Q7Z4P5 450 aa15.07■□□□□ 0
GPC1-201ENST00000264039 COMMD2Q86X83 199 aa15.07■□□□□ 0
GPC1-201ENST00000264039 GLB1L2Q8IW92 636 aa15.07■□□□□ 0
GPC1-201ENST00000264039 OR1J4Q8NGS1 313 aa15.07■□□□□ 0
GPC1-201ENST00000264039 OR51Q1Q8NH59 317 aa15.07■□□□□ 0
GPC1-201ENST00000264039 BRI3BPQ8WY22 251 aa15.07■□□□□ 0
GPC1-201ENST00000264039 BPIFA2Q96DR5 249 aa15.07■□□□□ 0
GPC1-201ENST00000264039 A4GALTQ9NPC4 353 aa15.07■□□□□ 0
GPC1-201ENST00000264039 MRPL17Q9NRX2 175 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 MYLKQ15746 1914 aa15.07■□□□□ 0
GPC1-201ENST00000264039 BRWD1Q9NSI6 2320 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3DA0A087WVF3 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3IA0A087WXS9 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3EA0A087X179 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3KA0A087X1G2 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 A0A1W2PRU2 124 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3BA6NDS4 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3FA6NER0 549 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 TVP23AA6NH52 213 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3LB9A6J9 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 NDUFS6O75380 124 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 C1orf105O95561 183 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3HP0C7X1 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 RAB6AP20340 208 aa15.07■□□□□ 0
GPC1-201ENST00000264039 PBX2P40425 430 aa15.07■□□□□ 0
GPC1-201ENST00000264039 NRG3P56975 720 aa15.07■□□□□ 0
GPC1-201ENST00000264039 LTBQ06643 244 aa15.07■□□□□ 0
GPC1-201ENST00000264039 FABP9Q0Z7S8 132 aa15.07■□□□□ 0
GPC1-201ENST00000264039 C21orf62-AS1Q17RA5 79 aa15.07■□□□□ 0
GPC1-201ENST00000264039 ZNF660Q6AZW8 331 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3GQ6DHY5 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3CQ6IPX1 549 aa15.07■□□□□ 0
GPC1-201ENST00000264039 OR2W3Q7Z3T1 314 aa15.07■□□□□ 0
GPC1-201ENST00000264039 COMTD1Q86VU5 262 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TBC1D3Q8IZP1 549 aaPredicted RBP15.07■□□□□ 0
GPC1-201ENST00000264039 AMER3Q8N944 861 aa15.07■□□□□ 0
GPC1-201ENST00000264039 TNFRSF13CQ96RJ3 184 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms