RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PARP16Q8N5Y8 322 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 FGF14Q92915 247 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 SLA2Q9H6Q3 261 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 VSX1Q9NZR4 365 aaPredicted RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 SLC6A14Q9UN76 642 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 TMEM72A0PK05 275 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 MMP11P24347 488 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 MRPS10P82664 201 aaKnown RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 FOXK2Q01167 660 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 TMEM196Q5HYL7 178 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 ZNF836Q6ZNA1 936 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 CCL4L1Q8NHW4 92 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 HYLS1Q96M11 299 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 NMNAT3Q96T66 252 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 ULBP2Q9BZM5 246 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 OR10A2Q9H208 303 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 DUSP22Q9NRW4 184 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 ZNF281Q9Y2X9 895 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 UBE2J1Q9Y385 318 aaPredicted RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 KLK4Q9Y5K2 254 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 SLC22A7Q9Y694 548 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 TTC3P53804 2025 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 NAP1L6A6NFF2 107 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 LCMT2O60294 686 aaKnown RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 ICAM2P13598 275 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 AGTR1P30556 359 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 SLC26A5P58743 744 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 FGL1Q08830 312 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 ECH1Q13011 328 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 MTFR2Q6P444 385 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 ARSKQ6UWY0 536 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 CD300LGQ6UXG3 332 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 TPRA1Q86W33 373 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 LRRC28Q86X40 367 aaPredicted RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 SIMC1Q8NDZ2 872 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 OR2T35Q8NGX2 323 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 CCNL2Q96S94 520 aaPredicted RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 UBE2ZQ9H832 354 aaPredicted RBP12.97□□□□□ -0.33
CDH3-201ENST00000264012 SERPINA5P05154 406 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 NPR2P20594 1047 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 CD1CP29017 333 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 CAV3P56539 151 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 TMEM201Q5SNT2 666 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 C5orf46Q6UWT4 87 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 PHC2Q8IXK0 858 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 SLC7A13Q8TCU3 470 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 ATOH1Q92858 354 aaPredicted RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 UBE2FQ969M7 185 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 OR5M11Q96RB7 305 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 FKBP14Q9NWM8 211 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 NXT1Q9UKK6 140 aaKnown RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 TMPRSS11EQ9UL52 423 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 FXYD1O00168 92 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 ZNF749O43361 778 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 WDPCPO95876 746 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 OR2T7P0C7T2 308 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 B4GALNT1Q00973 533 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 C17orf67Q0P5P2 114 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 PLK5Q496M5 336 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 LILRA6Q6PI73 481 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 OR2T27Q8NH04 317 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 CNOT9Q92600 299 aaKnown RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 SLC41A2Q96JW4 573 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 STACQ99469 402 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 DPCDQ9BVM2 203 aaPredicted RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 ABRACLQ9P1F3 81 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 C19orf53Q9UNZ5 99 aaPredicted RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 A0A1B0GX78 115 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 HMGN4O00479 90 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 SOCS6O14544 535 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 DNAJB6O75190 326 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 SCG5P05408 212 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 CSF1P09603 554 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 HOXB9P17482 250 aaPredicted RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.33
CDH3-201ENST00000264012 SPOCK1Q08629 439 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 PRICKLE2Q7Z3G6 844 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 STOML3Q8TAV4 291 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 CDC6Q99741 560 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 UBQLN3Q9H347 655 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 IKZF5Q9H5V7 419 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 MOKQ9UQ07 419 aa12.96□□□□□ -0.33
CDH3-201ENST00000264012 TRAV36DV7A0A075B6V5 113 aa12.96□□□□□ -0.34
CDH3-201ENST00000264012 TMED7-TICAM2A0A0A6YYA0 188 aa12.96□□□□□ -0.34
CDH3-201ENST00000264012 ZNF736B4DX44 427 aaPredicted RBP12.96□□□□□ -0.34
CDH3-201ENST00000264012 TRIM23P36406 574 aa12.96□□□□□ -0.34
CDH3-201ENST00000264012 AGBL4Q5VU57 503 aa12.96□□□□□ -0.34
CDH3-201ENST00000264012 SLC35D2Q76EJ3 337 aa12.96□□□□□ -0.34
CDH3-201ENST00000264012 NLRP8Q86W28 1048 aa12.96□□□□□ -0.34
CDH3-201ENST00000264012 BOKQ9UMX3 212 aaPredicted RBP12.96□□□□□ -0.34
CDH3-201ENST00000264012 TMED7Q9Y3B3 224 aa12.96□□□□□ -0.34
CDH3-201ENST00000264012 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms