RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10□□□□□ -0.81
CD44-201ENST00000263398 TTLL8A6PVC2 850 aa10□□□□□ -0.81
CD44-201ENST00000263398 B8ZZF3 427 aa10□□□□□ -0.81
CD44-201ENST00000263398 SLC43A1O75387 559 aa10□□□□□ -0.81
CD44-201ENST00000263398 ETV6P41212 452 aa10□□□□□ -0.81
CD44-201ENST00000263398 RRAS2P62070 204 aaPredicted RBP10□□□□□ -0.81
CD44-201ENST00000263398 POU3F1Q03052 451 aaPredicted RBP10□□□□□ -0.81
CD44-201ENST00000263398 CAMK2DQ13557 499 aa10□□□□□ -0.81
CD44-201ENST00000263398 RBMS2Q15434 407 aaKnown RBP10□□□□□ -0.81
CD44-201ENST00000263398 KRBOX4Q5JUW0 171 aa10□□□□□ -0.81
CD44-201ENST00000263398 ABHD17BQ5VST6 288 aa10□□□□□ -0.81
CD44-201ENST00000263398 VASNQ6EMK4 673 aa10□□□□□ -0.81
CD44-201ENST00000263398 LCN10Q6JVE6 187 aa10□□□□□ -0.81
CD44-201ENST00000263398 SLC16A9Q7RTY1 509 aa10□□□□□ -0.81
CD44-201ENST00000263398 LYSMD2Q8IV50 215 aa10□□□□□ -0.81
CD44-201ENST00000263398 OR52I1Q8NGK6 324 aa10□□□□□ -0.81
CD44-201ENST00000263398 GIMAP1Q8WWP7 306 aa10□□□□□ -0.81
CD44-201ENST00000263398 LYSMD1Q96S90 227 aa10□□□□□ -0.81
CD44-201ENST00000263398 NICN1Q9BSH3 213 aa10□□□□□ -0.81
CD44-201ENST00000263398 OR10A5Q9H207 317 aa10□□□□□ -0.81
CD44-201ENST00000263398 OR10A2Q9H208 303 aa10□□□□□ -0.81
CD44-201ENST00000263398 NRIP3Q9NQ35 241 aa10□□□□□ -0.81
CD44-201ENST00000263398 TMEM30AQ9NV96 361 aa10□□□□□ -0.81
CD44-201ENST00000263398 COQ3Q9NZJ6 369 aa10□□□□□ -0.81
CD44-201ENST00000263398 MAST2Q6P0Q8 1798 aa10□□□□□ -0.81
CD44-201ENST00000263398 A0A1B0GWA3 101 aa10□□□□□ -0.81
CD44-201ENST00000263398 SLC5A10A0PJK1 596 aa10□□□□□ -0.81
CD44-201ENST00000263398 TMEM212A6NML5 194 aa10□□□□□ -0.81
CD44-201ENST00000263398 KDM4EB2RXH2 506 aaPredicted RBP10□□□□□ -0.81
CD44-201ENST00000263398 GFYI3L273 518 aa10□□□□□ -0.81
CD44-201ENST00000263398 GDNFP39905 211 aa10□□□□□ -0.81
CD44-201ENST00000263398 FOXK2Q01167 660 aa10□□□□□ -0.81
CD44-201ENST00000263398 GAB1Q13480 694 aa10□□□□□ -0.81
CD44-201ENST00000263398 DUSP7Q16829 419 aa10□□□□□ -0.81
CD44-201ENST00000263398 LYPD4Q6UWN0 246 aa10□□□□□ -0.81
CD44-201ENST00000263398 ZNF546Q86UE3 836 aa10□□□□□ -0.81
CD44-201ENST00000263398 RCBTB1Q8NDN9 531 aa10□□□□□ -0.81
CD44-201ENST00000263398 OR6F1Q8NGZ6 308 aa10□□□□□ -0.81
CD44-201ENST00000263398 SLC2A12Q8TD20 617 aa10□□□□□ -0.81
CD44-201ENST00000263398 NANOS1Q8WY41 292 aaKnown RBP10□□□□□ -0.81
CD44-201ENST00000263398 PDXPQ96GD0 296 aa10□□□□□ -0.81
CD44-201ENST00000263398 ZNF285Q96NJ3 590 aa10□□□□□ -0.81
CD44-201ENST00000263398 SULT4A1Q9BR01 284 aa10□□□□□ -0.81
CD44-201ENST00000263398 HDAC8Q9BY41 377 aa10□□□□□ -0.81
CD44-201ENST00000263398 SAV1Q9H4B6 383 aaPredicted RBP10□□□□□ -0.81
CD44-201ENST00000263398 DUSP21Q9H596 190 aa10□□□□□ -0.81
CD44-201ENST00000263398 METTL17Q9H7H0 456 aaPredicted RBP10□□□□□ -0.81
CD44-201ENST00000263398 PRDM9Q9NQV7 894 aa10□□□□□ -0.81
CD44-201ENST00000263398 ATG4BQ9Y4P1 393 aa10□□□□□ -0.81
CD44-201ENST00000263398 B3GALT1Q9Y5Z6 326 aa10□□□□□ -0.81
CD44-201ENST00000263398 A0A1B0GV50 99 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SERINC4A6NH21 518 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 CD38P28907 300 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 BDKRB2P30411 391 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SSTR2P30874 369 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ERVFC1P60507 584 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 LTB4RQ15722 352 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 RTL6Q6ICC9 239 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SHISA6Q6ZSJ9 500 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 CD163Q86VB7 1156 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ZNF695Q8IW36 515 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 IL17RDQ8NFM7 739 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 OR4M1Q8NGD0 313 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 TMEM106AQ96A25 262 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 TCTN2Q96GX1 697 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ZNF419Q96HQ0 510 aaPredicted RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 PFDN5Q99471 154 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 HCAR1Q9BXC0 346 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 UBQLN3Q9H347 655 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 NDRG4Q9ULP0 352 aaKnown RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 FXYD1O00168 92 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 PLPP1O14494 284 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 CNOT4O95628 575 aaKnown RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 IGHG1P01857 330 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SERPINE2P07093 398 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ZNF28P17035 718 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 MMP11P24347 488 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ERV3-1Q14264 604 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 MLC1Q15049 377 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 Q499Y3 187 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 AADACL4Q5VUY2 407 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 MFSD12Q6NUT3 480 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 RTN4RL1Q86UN2 441 aaPredicted RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 FAM160A2Q8N612 972 aaPredicted RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 OR1J4Q8NGS1 313 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SORCS2Q96PQ0 1159 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ZBP1Q9H171 429 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 RLIMQ9NVW2 624 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 EDARQ9UNE0 448 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 NPFFR2Q9Y5X5 522 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SMCO3A2RU48 225 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SOCS6O14544 535 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ZFAND5O76080 213 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 CPNE6O95741 557 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 HLA-AP01891 365 aaKnown RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 UBBP0CG47 229 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 UBCP0CG48 685 aaKnown RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 MELKQ14680 651 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 TMEM52BQ4KMG9 183 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms