RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 SPTA1P02549 2419 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 TOX3O15405 576 aaPredicted RBP12.88□□□□□ -0.35
CDH1-201ENST00000261769 ATG12O94817 140 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 GPR85P60893 370 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 OR5J2Q8NH18 312 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 MZB1Q8WU39 189 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 MRI1Q9BV20 369 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 OR51B6Q9H340 312 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 HIF3AQ9Y2N7 669 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 ZNF182P17025 639 aaPredicted RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 MYF6P23409 242 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 AVPR2P30518 371 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 KIR2DL1P43626 348 aaPredicted RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 ATP1B3P54709 279 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 PPIAP62937 165 aaKnown RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 RETREG3Q86VR2 466 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 NAXDQ8IW45 347 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 LOC100509620A0A075B734 347 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 TCRBV3S1A0A5B6 114 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 OR14I1A6ND48 311 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 H3BSA7 217 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 GTF2F2P13984 249 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 AQP2P41181 271 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 H1FNTQ75WM6 255 aaPredicted RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 SLC35D2Q76EJ3 337 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 SSX6Q7RTT6 188 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 TMEM163Q8TC26 289 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 TTC9Q92623 222 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 MAELQ96JY0 434 aaKnown RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 ZNF587Q96SQ5 575 aaPredicted RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 NIPAL2Q9H841 368 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 OR6C65A6NJZ3 312 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 PLOD2O00469 737 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 NID1P14543 1247 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 RAC2P15153 192 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 PNLIPRP2P54317 469 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 BIDP55957 195 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 BTG2P78543 158 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 B4GALNT1Q00973 533 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 SIDT1Q9NXL6 827 aaKnown RBP12.87□□□□□ -0.35
CDH1-201ENST00000261769 A0A1B0GTQ1 180 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 PRH1P02810 166 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 THBS1P07996 1170 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 MAGEA2P43356 314 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 SELPLGQ14242 412 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 EXD3Q8N9H8 876 aa12.87□□□□□ -0.35
CDH1-201ENST00000261769 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 CD14P08571 375 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 SRSF5Q13243 272 aaKnown RBP12.86□□□□□ -0.35
CDH1-201ENST00000261769 IHHQ14623 411 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 HES3Q5TGS1 186 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 PLAG1Q6DJT9 500 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 EIF5AL1Q6IS14 154 aaKnown RBP12.86□□□□□ -0.35
CDH1-201ENST00000261769 GDPGP1Q6ZNW5 385 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 MINDY2Q8NBR6 621 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 WACQ9BTA9 647 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 FAM53CQ9NYF3 392 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 CHRNA9Q9UGM1 479 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 FBP2O00757 339 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 NRG2O14511 850 aaPredicted RBP12.86□□□□□ -0.35
CDH1-201ENST00000261769 FXYD6P3P58550 94 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 ARHGAP11BQ3KRB8 267 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 SLC25A25Q6KCM7 469 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 ASRGL1Q7L266 308 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 LOXL4Q96JB6 756 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 HMX2A2RU54 273 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 ABHD16AO95870 558 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 BCKDHBP21953 392 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 YRDCQ86U90 279 aaKnown RBP12.86□□□□□ -0.35
CDH1-201ENST00000261769 MEX3DQ86XN8 651 aaKnown RBP12.86□□□□□ -0.35
CDH1-201ENST00000261769 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 ST8SIA1Q92185 356 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 C12orf43Q96C57 262 aaKnown RBP12.86□□□□□ -0.35
CDH1-201ENST00000261769 SDF2Q99470 211 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 MFRPQ9BY79 579 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 CLEC1BQ9P126 229 aa12.86□□□□□ -0.35
CDH1-201ENST00000261769 OR2A25A4D2G3 310 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 PPM1DO15297 605 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 CXCR4P61073 352 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 FBXO27Q8NI29 283 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 RFT1Q96AA3 541 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 FOXRED1Q96CU9 486 aaPredicted RBP12.85□□□□□ -0.35
CDH1-201ENST00000261769 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 TUBB1Q9H4B7 451 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 ETAA1Q9NY74 926 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 COPZ2Q9P299 210 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 DENRO43583 198 aaKnown RBP12.85□□□□□ -0.35
CDH1-201ENST00000261769 MOSPD3O75425 235 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 BSGP35613 385 aa12.85□□□□□ -0.35
CDH1-201ENST00000261769 SLC1A3P43003 542 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms