RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CXCL14O95715 111 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 CBX7O95931 251 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 TGM6O95932 706 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 SRMP19623 302 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 NDUFS1P28331 727 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 S100A11P31949 105 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 ERVFC1P60507 584 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 SIRPAP78324 504 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 PLA2G7Q13093 441 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 CDK5R1Q15078 307 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 FAM199XQ6PEV8 388 aaPredicted RBP14.66□□□□□ -0.06
LMNB1-201ENST00000261366 GLDNQ6ZMI3 551 aaPredicted RBP14.66□□□□□ -0.06
LMNB1-201ENST00000261366 TMUB2Q71RG4 321 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 MTSS1LQ765P7 747 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 LSM14AQ8ND56 463 aaKnown RBP14.66□□□□□ -0.06
LMNB1-201ENST00000261366 MTHFD2LQ9H903 347 aaPredicted RBP14.66□□□□□ -0.06
LMNB1-201ENST00000261366 PRDM9Q9NQV7 894 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 CA5BQ9Y2D0 317 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 TRPM6Q9BX84 2022 aa14.66□□□□□ -0.06
LMNB1-201ENST00000261366 KIAA0100Q14667 2235 aaKnown RBP14.65□□□□□ -0.06
LMNB1-201ENST00000261366 LILRB3O75022 631 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 PRNPP04156 253 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 RPN2P04844 631 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 H2BFSP57053 126 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 RPS11P62280 158 aaKnown RBP eCLIP14.65□□□□□ -0.06
LMNB1-201ENST00000261366 KCNAB1Q14722 419 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 TRIM43Q96BQ3 446 aaPredicted RBP14.65□□□□□ -0.06
LMNB1-201ENST00000261366 SMIM19Q96E16 107 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 PAWRQ96IZ0 340 aaKnown RBP14.65□□□□□ -0.06
LMNB1-201ENST00000261366 GFI1Q99684 422 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 JAM3Q9BX67 310 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 IL21RQ9HBE5 538 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 IFT46Q9NQC8 304 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 ZNF223Q9UK11 482 aaPredicted RBP14.65□□□□□ -0.06
LMNB1-201ENST00000261366 MED31Q9Y3C7 131 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 RNF215Q9Y6U7 377 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 ATG2BQ96BY7 2078 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 PIN1P1O15428 100 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 CDK2P24941 298 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 WASP42768 502 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 RAG2P55895 527 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 SEC61A1P61619 476 aaKnown RBP14.65□□□□□ -0.06
LMNB1-201ENST00000261366 TRAM1Q15629 374 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 DCAF12L2Q5VW00 463 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 METRNLQ641Q3 311 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 ASPGQ86U10 573 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 SDF2Q99470 211 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 NRIP3Q9NQ35 241 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 TMEM74BQ9NUR3 256 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 KCNE5Q9UJ90 142 aa14.65□□□□□ -0.06
LMNB1-201ENST00000261366 A0A1B0GUH1 482 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 C4orf47A7E2U8 309 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 VEGFDO43915 354 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 HIST1H1CP16403 213 aaKnown RBP14.64□□□□□ -0.07
LMNB1-201ENST00000261366 AKR1D1P51857 326 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 IKZF1Q13422 519 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 OR2L5Q8NG80 312 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 OR4D10Q8NGI6 311 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 OR8S1Q8NH09 359 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 THEM6Q8WUY1 208 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 ZNF681Q96N22 645 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 C7orf50Q9BRJ6 194 aaKnown RBP14.64□□□□□ -0.07
LMNB1-201ENST00000261366 PCBD2Q9H0N5 130 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 ANKRD10Q9NXR5 420 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 CACNA1IQ9P0X4 2223 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 LDB3O75112 727 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 C4BPBP20851 252 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 ERVK-21P61565 698 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 TRA2BP62995 288 aaKnown RBP14.64□□□□□ -0.07
LMNB1-201ENST00000261366 CDK3Q00526 305 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 DEFB134Q4QY38 66 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 ELP2Q6IA86 826 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 CMIPQ8IY22 773 aa14.64□□□□□ -0.07
LMNB1-201ENST00000261366 LRRC72A6NJI9 287 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 SERPINA3P01011 423 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 RLN2P04090 185 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 ZNF888P0CJ79 500 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-201ENST00000261366 VSIG10L2P0DP72 767 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 ERGP11308 486 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 P2RX1P51575 399 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 ARHGAP19Q14CB8 494 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 DHCR24Q15392 516 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 FAM69AQ5T7M9 428 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 OTPQ5XKR4 325 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 OR7E24Q6IFN5 339 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-201ENST00000261366 NR4A3Q92570 626 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 LRRC3BQ96PB8 259 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 MBNL1Q9NR56 388 aaKnown RBP14.63□□□□□ -0.07
LMNB1-201ENST00000261366 C2orf42Q9NWW7 574 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 ING1Q9UK53 422 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-201ENST00000261366 IER3IP1Q9Y5U9 82 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 TRAV1-2A0A0B4J238 106 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 A0A1B0GTH9 108 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 FAM74A7A6NL05 159 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 IFITM5A6NNB3 132 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 IFNGR1P15260 489 aa14.63□□□□□ -0.07
LMNB1-201ENST00000261366 RPL4P36578 427 aaKnown RBP14.63□□□□□ -0.07
LMNB1-201ENST00000261366 EEF1A1P68104 462 aaKnown RBP14.63□□□□□ -0.07
LMNB1-201ENST00000261366 SORDQ00796 357 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms