RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CCNJQ5T5M9 372 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 PAQR6Q6TCH4 344 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF836Q6ZNA1 936 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 HIST2H3AQ71DI3 136 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 NDUFAF7Q7L592 441 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CCDC71LQ8N9Z2 235 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 KLHDC9Q8NEP7 349 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF681Q96N22 645 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 PTCHD1Q96NR3 888 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 MRI1Q9BV20 369 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 GPR174Q9BXC1 333 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 LINC00597Q9H2U6 94 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZMAT3Q9HA38 289 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 B3GAT2Q9NPZ5 323 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZFP57Q9NU63 452 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC23A1Q9UHI7 598 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CDHR4A6H8M9 788 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ATG12O94817 140 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 DUSP7Q16829 419 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ALKAL1Q6UXT8 129 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 PNPLA2Q96AD5 504 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 SENP5Q96HI0 755 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 FAM212BQ9NTI7 297 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 EHFQ9NZC4 300 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 DIMT1Q9UNQ2 313 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 FLVCR2Q9UPI3 526 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ANTXRLA6NF34 631 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 MTNR1BP49286 362 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 RFLNAQ6ZTI6 216 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 TAS1R1Q7RTX1 841 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC2A12Q8TD20 617 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 YIPF5Q969M3 257 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 TMEM100Q9NV29 134 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF629Q9UEG4 869 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 GAB2Q9UQC2 676 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 MEGF11A6BM72 1044 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 RDH16O75452 317 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 C21orf62-AS1Q17RA5 79 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CLEC9AQ6UXN8 241 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CBARPQ8N350 705 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 AVL9Q8NBF6 648 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ALOXE3Q9BYJ1 711 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 VSX1Q9NZR4 365 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 A3GALT2U3KPV4 340 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CSF3P09919 207 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR8G3PP0DMU2 310 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 NR2C1P13056 603 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 NME1P15531 152 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 SERPINA2P20848 420 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 HCCSP53701 268 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 SEC61A1P61619 476 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 TLE3Q04726 772 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF542PQ5EBM4 170 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 DLEU7Q6UYE1 221 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF480Q8WV37 535 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 TSACCQ96A04 125 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 NXF5Q9H1B4 397 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 POFUT1Q9H488 388 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CNTRLQ7Z7A1 2325 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 YY2O15391 372 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 DPM1O60762 260 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 CNR1P21554 472 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 GZMKP49863 264 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 BTG1P62324 171 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 LRIF1Q5T3J3 769 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 KIAA0907Q7Z7F0 614 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR13C2Q8NGS9 318 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 LRIG1Q96JA1 1093 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 SUCNR1Q9BXA5 334 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 PIGMQ9H3S5 423 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 SDK1Q7Z5N4 2213 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 TAPBPO15533 448 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 KCNK2O95069 426 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 PSMB5P28074 263 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 DHCR24Q15392 516 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 HMGN3Q15651 99 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 FAAP20Q6NZ36 180 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 FIP1L1Q6UN15 594 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 DNAAF1Q8NEP3 725 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 PDLIM5Q96HC4 596 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 VPS25Q9BRG1 176 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 C11orf84Q9BUA3 381 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 TLR9Q9NR96 1032 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 RLIMQ9NVW2 624 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF281Q9Y2X9 895 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 INSL6Q9Y581 213 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 URB1O60287 2271 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR6C76A6NM76 312 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 A8MXE2 369 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF28P17035 718 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 CX3CR1P49238 355 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 PER3P56645 1201 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 DGCR2P98153 550 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 BDH1Q02338 343 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 PLCXD2Q0VAA5 305 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 C1orf61Q13536 156 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 KCNRGQ8N5I3 272 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms