RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 AMBNQ9NP70 447 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 IL20RAQ9UHF4 553 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 TEKT2Q9UIF3 430 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 KALRNO60229 2985 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 TNRC6AQ8NDV7 1962 aaKnown RBP15.84■□□□□ 0.13
SRSF1-201ENST00000258962 C2orf72A6NCS6 295 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 ELOA3DA6NLF2 546 aaPredicted RBP15.84■□□□□ 0.13
SRSF1-201ENST00000258962 WISP1O95388 367 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 PGCP20142 388 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 TACR3P29371 465 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 ST13P50502 369 aaKnown RBP15.84■□□□□ 0.13
SRSF1-201ENST00000258962 CBFBQ13951 182 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 NEDD8Q15843 81 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 PGGHGQ32M88 737 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 ELOA3BQ3SY89 546 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 FCRLBQ6BAA4 426 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 IGFL3Q6UXB1 125 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 AHSA2Q719I0 299 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 ARMC10Q8N2F6 343 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 SIRT6Q8N6T7 355 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 ELOA3Q8NG57 546 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 GPR119Q8TDV5 335 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 GGHQ92820 318 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 TMEM43Q9BTV4 400 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 SLC19A3Q9BZV2 496 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 C12orf10Q9HB07 376 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 CLN6Q9NWW5 311 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 DNAJC27Q9NZQ0 273 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 COMMD3-BMI1R4GMX3 469 aa15.84■□□□□ 0.13
SRSF1-201ENST00000258962 TRAV27A0A087WT01 109 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 SH3D21A4FU49 640 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 ZNF701M0R085 212 aaPredicted RBP15.83■□□□□ 0.12
SRSF1-201ENST00000258962 ENTPD6O75354 484 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 PTP4A3O75365 173 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 MT-ND2P03891 347 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 SAGP10523 405 aaPredicted RBP15.83■□□□□ 0.12
SRSF1-201ENST00000258962 PCMT1P22061 227 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 MASP1P48740 699 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 PMS2P3Q13401 168 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 QPRTQ15274 297 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 OCLNQ16625 522 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 THSD4Q6ZMP0 1018 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 LINC00696Q6ZRV3 163 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 SLC46A3Q7Z3Q1 461 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 BCDIN3DQ7Z5W3 292 aaKnown RBP15.83■□□□□ 0.12
SRSF1-201ENST00000258962 SVOPQ8N4V2 548 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 FAM26EQ8N5C1 309 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 SGTBQ96EQ0 304 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 MFRPQ9BY79 579 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 UBQLN3Q9H347 655 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 HHATLQ9HCP6 504 aa15.83■□□□□ 0.12
SRSF1-201ENST00000258962 CLCA1A8K7I4 914 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 LRRN3E7EW58 273 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 BHLHE40O14503 412 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 RGS10O43665 173 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 TLX2O43763 284 aaPredicted RBP15.82■□□□□ 0.12
SRSF1-201ENST00000258962 RCBTB2O95199 551 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 NUDT14O95848 222 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 CASRP41180 1078 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 MLLT10P55197 1068 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 EGR4Q05215 589 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 C17orf67Q0P5P2 114 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 MFAP5Q13361 173 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 SNAPC1Q16533 368 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 SLC25A30Q5SVS4 291 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 ABHD17BQ5VST6 288 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 OR5M10Q6IEU7 315 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 RPL13AP3Q6NVV1 102 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 SMARCD3Q6STE5 483 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 OR2T33Q8NG76 320 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 OR51A7Q8NH64 312 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 TMEM163Q8TC26 289 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 PSMF1Q92530 271 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 YIPF3Q9GZM5 350 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 CCDC90BQ9GZT6 254 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 CDCP1Q9H5V8 836 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 MCCC2Q9HCC0 563 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 OSGIN1Q9UJX0 560 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 YARS2Q9Y2Z4 477 aaKnown RBP15.82■□□□□ 0.12
SRSF1-201ENST00000258962 PCDHGB1Q9Y5G3 927 aa15.82■□□□□ 0.12
SRSF1-201ENST00000258962 ANKUB1A6NFN9 424 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 SURF4O15260 269 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 CDC40O60508 579 aaKnown RBP eCLIP15.81■□□□□ 0.12
SRSF1-201ENST00000258962 HCN1O60741 890 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 NOL3O60936 208 aaKnown RBP15.81■□□□□ 0.12
SRSF1-201ENST00000258962 OR7A10O76100 309 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 CH25HO95992 272 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 IGF2P01344 180 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 GP1BBP13224 206 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 SLC15A1P46059 708 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 MLF1P58340 268 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 MVKQ03426 396 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 CNPY1Q3B7I2 92 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 SYT14P1Q58G82 188 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 PRSS48Q7RTY5 328 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 OAFQ86UD1 273 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 LRRC17Q8N6Y2 441 aa15.81■□□□□ 0.12
SRSF1-201ENST00000258962 RBMXL3Q8N7X1 1067 aaKnown RBP15.81■□□□□ 0.12
SRSF1-201ENST00000258962 ZNF420Q8TAQ5 688 aaPredicted RBP15.81■□□□□ 0.12
SRSF1-201ENST00000258962 MYDGFQ969H8 173 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms