RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 VPS33AQ96AX1 596 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 NAA11Q9BSU3 229 aaPredicted RBP16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 TRAF4Q9BUZ4 470 aaPredicted RBP16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 SLCO5A1Q9H2Y9 848 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 ALG2Q9H553 416 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 NKIRAS1Q9NYS0 192 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 TAS2R16Q9NYV7 291 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 P2RX2Q9UBL9 471 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 MALT1Q9UDY8 824 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC25A15Q9Y619 301 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 CR1P17927 2039 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 CDHR4A6H8M9 788 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 FAAHO00519 579 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 EIF1BO60739 113 aaKnown RBP16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 UQCRBP14927 111 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 IDUAP35475 653 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 DSTNP60981 165 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 PPP2R2BQ00005 443 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 CEACAM7Q14002 265 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 GABRA6Q16445 453 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 TMEM99Q8N816 258 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC38A5Q8WUX1 472 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 ADAM19Q9H013 955 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 TPT1P8Q9HAU6 139 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC7A10Q9NS82 523 aa16.72■□□□□ 0.27
TM6SF1-201ENST00000258909 ABCA1O95477 2261 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 DSPPQ9NZW4 1301 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 E7EQL1 145 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 M0R1B8 84 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 UBDO15205 165 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 AKR7A3O95154 331 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 TFPTP0C1Z6 253 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 PRG2P13727 222 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 CXCR1P25024 350 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 ACAA2P42765 397 aaKnown RBP16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC18A1P54219 525 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC17A1Q14916 467 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 OR7A5Q15622 319 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 LIN52Q52LA3 116 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 C6orf10Q5SRN2 563 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 OTUD3Q5T2D3 398 aaPredicted RBP16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 TSPO2Q5TGU0 170 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC22A25Q6T423 547 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 CLIP4Q8N3C7 705 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 TLCD1Q96CP7 247 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 MUS81Q96NY9 551 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 TMBIM4Q9HC24 238 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 SDR39U1Q9NRG7 319 aaPredicted RBP16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 ZIM2Q9NZV7 527 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 UPB1Q9UBR1 384 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 POU2F3Q9UKI9 436 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 ZNF443Q9Y2A4 671 aaPredicted RBP16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC9A8Q9Y2E8 581 aa16.71■□□□□ 0.27
TM6SF1-201ENST00000258909 NUDT7P0C024 238 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 CD40P25942 277 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 POLR2JP52435 117 aaKnown RBP16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 CRISP3P54108 245 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 KRTAP1-1Q07627 177 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 GSTA3Q16772 222 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 PAQR6Q6TCH4 344 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 TMEM108Q6UXF1 575 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 WDR31Q8NA23 367 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 TMEM19Q96HH6 336 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 ITCHQ96J02 903 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 REG4Q9BYZ8 158 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 RMND5AQ9H871 391 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 FAIMQ9NVQ4 179 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 PARPBPQ9NWS1 579 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 B3GALT5Q9Y2C3 310 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 CHST2Q9Y4C5 530 aa16.7■□□□□ 0.26
TM6SF1-201ENST00000258909 LIPT2A6NK58 231 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 KIAA1324LA8MWY0 1029 aaPredicted RBP16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 PDLIM1O00151 329 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 ZCCHC18P0CG32 403 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 SLC25A3Q00325 362 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 ETFDHQ16134 617 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 SLC2A7Q6PXP3 512 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 KLHL17Q6TDP4 642 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 B3GLCTQ6Y288 498 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 SSX8Q7RTT4 187 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 GPAT4Q86UL3 456 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 DTX2Q86UW9 622 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 ZNF440Q8IYI8 595 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 HS6ST2Q96MM7 605 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 ZNF385AQ96PM9 386 aaKnown RBP16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 ADPRHL2Q9NX46 363 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 CALML5Q9NZT1 146 aa16.69■□□□□ 0.26
TM6SF1-201ENST00000258909 GPIP06744 558 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 THBS1P07996 1170 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 CDH2P19022 906 aaPredicted RBP16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 NCF2P19878 526 aaPredicted RBP16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 PTAFRP25105 342 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 MAP2K6P52564 334 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 COPZ1P61923 177 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 HOXC5Q00444 222 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 AGAP6Q5VW22 663 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 WBP2NLQ6ICG8 309 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 OR7E24Q6IFN5 339 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 SERPINA11Q86U17 422 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 MIER2Q8N344 545 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms