RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 EDARQ9UNE0 448 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 LOC102725191A0A1B0GVB3 256 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 NUPL2O15504 423 aaKnown RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 ARAFP10398 606 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 RPA2P15927 270 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 BCL6P41182 706 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 PGFP49763 221 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 CCDC71Q8IV32 467 aaPredicted RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 FUOMA2VDF0 154 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 POM121CA8CG34 1229 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 GM2AP17900 193 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 TNFSF4P23510 183 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 DCDP81605 110 aaKnown RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 SEMA3BQ13214 749 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 SLX4IPQ5VYV7 408 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 C3P1Q6ZMU1 363 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 LANCL3Q6ZV70 420 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 MKXQ8IYA7 352 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 OR13C9Q8NGT0 318 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 EDAQ92838 391 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF597Q96LX8 424 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 BOKQ9UMX3 212 aaPredicted RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 A0A1B0GVG6 124 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 MSR1P21757 451 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 FAM43BQ6ZT52 329 aaPredicted RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ZC3HAV1LQ96H79 300 aaKnown RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 AP1S3Q96PC3 154 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 RCE1Q9Y256 329 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 UBR2Q8IWV8 1755 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 A0A1W2PQ09 198 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 B4DXG7 233 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 UTS2O95399 124 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 PTTG1O95997 202 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 EFNA3P52797 238 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 RPS25P62851 125 aaKnown RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 SULF2Q8IWU5 870 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 FNDC9Q8TBE3 224 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 UBXN10Q96LJ8 280 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 GLIPR2Q9H4G4 154 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF223Q9UK11 482 aaPredicted RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ATG4BQ9Y4P1 393 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 PRKNO60260 465 aaPredicted RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 CSF1P09603 554 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ACP2P11117 423 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 GIPRP48546 466 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 AFF3P51826 1226 aaKnown RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 BIDP55957 195 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 APOOLQ6UXV4 268 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF566Q969W8 418 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 OR51J1Q9H342 316 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 SRPX2O60687 465 aaPredicted RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ATG12O94817 140 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 SERPINA7P05543 415 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 CLDN6P56747 220 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC14A1Q13336 389 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 SHHQ15465 462 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 RSPO2Q6UXX9 243 aaPredicted RBP17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 NOX3Q9HBY0 568 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 RAB27BO00194 218 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 FURINP09958 794 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ALDH3B1P43353 468 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 TNK1Q13470 666 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 METTL11BQ5VVY1 283 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 PAQR8Q8TEZ7 354 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 C17orf50Q8WW18 174 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 EMC3Q9P0I2 261 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 RPH3ALQ9UNE2 315 aa17.36■□□□□ 0.37
SMARCC1-201ENST00000254480 ITGAMP11215 1152 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 TNFSF8P32971 234 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF529Q6P280 563 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 Q6ZSR9 355 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF595Q8IYB9 648 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 BRIX1Q8TDN6 353 aaKnown RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 NOSIPQ9Y314 301 aaKnown RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 PRAMEF27A3QJZ7 478 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 C7orf72A4D263 438 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 CEBPZOSA8MTT3 80 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 IFNA17P01571 189 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 MLF2Q15773 248 aaPredicted RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 PRAMEF9Q5VWM5 478 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 PAPD4Q6PIY7 484 aaKnown RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 AAED1Q7RTV5 226 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC7A5P1Q8MH63 180 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 TM4SF18Q96CE8 201 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 PDLIM5Q96HC4 596 aaKnown RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 TEX37Q96LM6 180 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 MFFQ9GZY8 342 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 MMP12P39900 470 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 SSR4P51571 173 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 GK2Q14410 553 aaPredicted RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 UTP23Q9BRU9 249 aaKnown RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 PITHD1Q9GZP4 211 aaPredicted RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 GALNT9Q9HCQ5 603 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 SF3A2Q15428 464 aaKnown RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 WBP2Q969T9 261 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 NICN1Q9BSH3 213 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 IL37Q9NZH6 218 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 NUBP2Q9Y5Y2 271 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 CEPT1Q9Y6K0 416 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms