RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SKP1P63208 163 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 IL18Q14116 193 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 RTL4Q6ZR62 310 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 ZNRF4Q8WWF5 429 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 NMNAT3Q96T66 252 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 RNF32Q9H0A6 362 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 UBE2ZQ9H832 354 aaPredicted RBP14.46□□□□□ -0.1
LRFN1-201ENST00000248668 ADGRL4Q9HBW9 690 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 SLC22A31A6NKX4 558 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 FGF9P31371 208 aaPredicted RBP14.45□□□□□ -0.1
LRFN1-201ENST00000248668 HTR3AP46098 478 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 ERVK-25P63136 954 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 FHL1Q13642 323 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 GLYR1Q49A26 553 aaPredicted RBP14.45□□□□□ -0.1
LRFN1-201ENST00000248668 ULK3Q6PHR2 472 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 CD200R1LQ6Q8B3 271 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 GLCCI1Q86VQ1 547 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 OR6K6Q8NGW6 343 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 RASD2Q96D21 266 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 NXF5Q9H1B4 397 aaKnown RBP14.45□□□□□ -0.1
LRFN1-201ENST00000248668 ISYNA1Q9NPH2 558 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 MKKSQ9NPJ1 570 aaPredicted RBP14.45□□□□□ -0.1
LRFN1-201ENST00000248668 ZMIZ1Q9ULJ6 1067 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 RNF215Q9Y6U7 377 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 FAM25AB3EWG3 89 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 FAM25CB3EWG5 89 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 FAM25GB3EWG6 89 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 PEPDP12955 493 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 SLC6A6P31641 620 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 CTBP2P56545 445 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 TBRG1Q3YBR2 411 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 VWA2Q5GFL6 755 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 DNAJA4Q8WW22 397 aaPredicted RBP14.45□□□□□ -0.1
LRFN1-201ENST00000248668 TMCO6Q96DC7 493 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 ATF6BQ99941 703 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 NDC1Q9BTX1 674 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 B3GNT4Q9C0J1 378 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 POLE3Q9NRF9 147 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 FBXL21Q9UKT6 434 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 TSC22D2O75157 780 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 BCKDHBP21953 392 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 GABRA4P48169 554 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 TMEM151BQ8IW70 566 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 LSMEM1Q8N8F7 131 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 AP3S1Q92572 193 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF524Q96C55 264 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 SGTBQ96EQ0 304 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 WDFY2Q96P53 400 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 SNX18Q96RF0 628 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 ADOQ96SZ5 270 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 G6PC3Q9BUM1 346 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 C11orf54Q9H0W9 315 aaPredicted RBP14.45□□□□□ -0.1
LRFN1-201ENST00000248668 TRIM36Q9NQ86 728 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 SLC2A4RGQ9NR83 387 aa14.45□□□□□ -0.1
LRFN1-201ENST00000248668 A0A1B0GVT2 93 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 SOX30O94993 753 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF85Q03923 595 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 GALEQ14376 348 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 APOOLQ6UXV4 268 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF550Q7Z398 422 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF615Q8N8J6 731 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 ST6GAL2Q96JF0 529 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 CUTCQ9NTM9 273 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 POLHQ9Y253 713 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 TRAPPC4Q9Y296 219 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 RP1L1Q8IWN7 2480 aaPredicted RBP14.44□□□□□ -0.1
LRFN1-201ENST00000248668 TLCD2A6NGC4 264 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 POLR1CO15160 346 aaPredicted RBP14.44□□□□□ -0.1
LRFN1-201ENST00000248668 RGS9O75916 674 aaPredicted RBP14.44□□□□□ -0.1
LRFN1-201ENST00000248668 TSSK2Q96PF2 358 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 DHRS9Q9BPW9 319 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 NARFLQ9H6Q4 476 aa14.44□□□□□ -0.1
LRFN1-201ENST00000248668 NPIPB9F8W1W9 429 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 KHNYNO15037 678 aaKnown RBP14.43□□□□□ -0.1
LRFN1-201ENST00000248668 MT-ND5P03915 603 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 ZP2Q05996 745 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 SCN1BQ07699 218 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 SMAD4Q13485 552 aaKnown RBP14.43□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF141Q15928 474 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 RPL13AP3Q6NVV1 102 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 CEACAM19Q7Z692 300 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 GLRX5Q86SX6 157 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 MOSPD2Q8NHP6 518 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 PTPMT1Q8WUK0 201 aaPredicted RBP14.43□□□□□ -0.1
LRFN1-201ENST00000248668 HOXB13Q92826 284 aaPredicted RBP14.43□□□□□ -0.1
LRFN1-201ENST00000248668 MED18Q9BUE0 208 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF426Q9BUY5 554 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.43□□□□□ -0.1
LRFN1-201ENST00000248668 ASB6Q9NWX5 421 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 PAHP00439 452 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 TFP02787 698 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 FUT7Q11130 342 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 OTPQ5XKR4 325 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 C3orf49Q96BT1 292 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 ORAI1Q96D31 301 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 RANGRFQ9HD47 186 aaPredicted RBP14.43□□□□□ -0.1
LRFN1-201ENST00000248668 GVINP1Q7Z2Y8 2422 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 NDUFB2O95178 105 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 IFNGP01579 166 aa14.43□□□□□ -0.1
LRFN1-201ENST00000248668 CLPSP04118 112 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms