RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 FAM109AQ8N4B1 249 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 GPR137Q96N19 417 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 RBCK1Q9BYM8 510 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 CD93Q9NPY3 652 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 CPNE7Q9UBL6 633 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 GSTZ1O43708 216 aaPredicted RBP17.19■□□□□ 0.34
CPSF3-201ENST00000238112 CXCL3P19876 107 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 GSG1Q2KHT4 349 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 FBXO46Q6PJ61 603 aaPredicted RBP17.19■□□□□ 0.34
CPSF3-201ENST00000238112 BTN2A1Q7KYR7 527 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 PRSS45Q7RTY3 260 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 IZUMO1Q8IYV9 350 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 OR51Q1Q8NH59 317 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 RPLP0P6Q8NHW5 317 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 SMIM4Q8WVI0 70 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 GIMAP1Q8WWP7 306 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 TTC9Q92623 222 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 POT1Q9NUX5 634 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 NCDNQ9UBB6 729 aa17.19■□□□□ 0.34
CPSF3-201ENST00000238112 CTDSPLO15194 276 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 CD1AP06126 327 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 PSMB10P40306 273 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 DIO1P49895 249 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 RAG2P55895 527 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 DYRK1AQ13627 763 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 FAM53BQ14153 422 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 MTFR2Q6P444 385 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 KIAA1324Q6UXG2 1013 aaKnown RBP17.18■□□□□ 0.34
CPSF3-201ENST00000238112 DPY19L2P2Q6ZN68 376 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 OR6K6Q8NGW6 343 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 HSPA12BQ96MM6 686 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 NMNAT3Q96T66 252 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 ORAI3Q9BRQ5 295 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 ACTR6Q9GZN1 396 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 CCDC86Q9H6F5 360 aaKnown RBP17.18■□□□□ 0.34
CPSF3-201ENST00000238112 B3GNT2Q9NY97 397 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 TMA7Q9Y2S6 64 aaKnown RBP17.18■□□□□ 0.34
CPSF3-201ENST00000238112 DOCK8Q8NF50 2099 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 SELENOFO60613 162 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 GUSBP08236 651 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 GDNFP39905 211 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 PER3P56645 1201 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 KLF9Q13886 244 aaPredicted RBP17.18■□□□□ 0.34
CPSF3-201ENST00000238112 FGFBP1Q14512 234 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 ZSWIM7Q19AV6 140 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 OR9A4Q8NGU2 314 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 OR56B4Q8NH76 319 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 RIT1Q92963 219 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 AUNIPQ9H7T9 357 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 NOX4Q9NPH5 578 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 COPS3Q9UNS2 423 aa17.18■□□□□ 0.34
CPSF3-201ENST00000238112 A0A1W2PQ72 361 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 FAM221BA6H8Z2 402 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 SSNA1O43805 119 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 GPRIN2O60269 458 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 PPM1BO75688 479 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 WNT1P04628 370 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 ANKRD34CP0C6C1 535 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 SRMP19623 302 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 S1PR1P21453 382 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 ZNF141Q15928 474 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 LINGO2Q7L985 606 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 OOSP2Q86WS3 158 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 C7orf57Q8NEG2 295 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 ANGPTL6Q8NI99 470 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 PHYHIPQ92561 330 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 RBM18Q96H35 190 aaKnown RBP17.17■□□□□ 0.34
CPSF3-201ENST00000238112 CMTM3Q96MX0 182 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 DERL3Q96Q80 235 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 TMEM106CQ9BVX2 250 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 RABL2AQ9UBK7 228 aaPredicted RBP17.17■□□□□ 0.34
CPSF3-201ENST00000238112 RABL2BQ9UNT1 228 aa17.17■□□□□ 0.34
CPSF3-201ENST00000238112 PCDHGA9Q9Y5G4 932 aaKnown RBP17.17■□□□□ 0.34
CPSF3-201ENST00000238112 A0A1B0GVI7 797 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 PDCD5O14737 125 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 EGFP01133 1207 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 SYPP08247 313 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 SPI1P17947 270 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 STX4Q12846 297 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 ST3GAL2Q16842 350 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 SLC35D3Q5M8T2 416 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 FGD2Q7Z6J4 655 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 CMTM4Q8IZR5 234 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 ZNF687Q8N1G0 1237 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 BEST4Q8NFU0 473 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 SPRTNQ9H040 489 aaPredicted RBP17.16■□□□□ 0.34
CPSF3-201ENST00000238112 Q9N2J8 555 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 AKAP7Q9P0M2 348 aaPredicted RBP17.16■□□□□ 0.34
CPSF3-201ENST00000238112 ZNF593O00488 134 aaPredicted RBP17.16■□□□□ 0.34
CPSF3-201ENST00000238112 PPP1CAP62136 330 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 DEFB110Q30KQ9 67 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 NDUFAF6Q330K2 333 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 TEX261Q6UWH6 196 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 CMIPQ8IY22 773 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 BMPERQ8N8U9 685 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 NPEPL1Q8NDH3 523 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 OR11H4Q8NGC9 324 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 ZNRF4Q8WWF5 429 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 VSTM2LQ96N03 204 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 G6PC3Q9BUM1 346 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms