RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 KIAA1024LP59773 190 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 NANOS3P60323 173 aaKnown RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 CSRP2Q16527 193 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 UBE2NLQ5JXB2 153 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 AGBL4Q5VU57 503 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 FAM198BQ6UWH4 519 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 MTSS1LQ765P7 747 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 KCTD20Q7Z5Y7 419 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 UBE2Q1Q7Z7E8 422 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 RNF113BQ8IZP6 322 aaKnown RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 ZNF619Q8N2I2 560 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 RAB42Q8N4Z0 105 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 MRPL43Q8N983 215 aaKnown RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 TMEM52Q8NDY8 209 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ERMAPQ96PL5 475 aaPredicted RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 OR1F2PQ96R84 312 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ACTR6Q9GZN1 396 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 NOX3Q9HBY0 568 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 NRIP3Q9NQ35 241 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 SDHAF2Q9NX18 166 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 WBP1LQ9NX94 342 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 DEC1Q9P2X7 70 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 ZNF69Q9UC07 566 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 MRPS2Q9Y399 296 aaKnown RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 MED31Q9Y3C7 131 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 MUC22E2RYF6 1773 aaPredicted RBP11.41□□□□□ -0.58
NUP88-201ENST00000225696 EML5Q05BV3 1969 aa11.41□□□□□ -0.58
NUP88-201ENST00000225696 CACNA1CQ13936 2221 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 TRANK1O15050 2925 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 TRBV23OR9-2A0A075B6M9 112 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 TCRBV16S1A1N1A0A5B0 115 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 FAM171A2A8MVW0 826 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 CTDSPLO15194 276 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 NUPL2O15504 423 aaKnown RBP11.4□□□□□ -0.58
NUP88-201ENST00000225696 ADH1CP00326 375 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 CEACAM5P06731 702 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 THBS1P07996 1170 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 TMIGD3P0DMS9 266 aaPredicted RBP11.4□□□□□ -0.58
NUP88-201ENST00000225696 EDNRAP25101 427 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 MAT2AP31153 395 aaKnown RBP11.4□□□□□ -0.58
NUP88-201ENST00000225696 TNFRSF17Q02223 184 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 MELKQ14680 651 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 HSD17B12Q53GQ0 312 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 FHL5Q5TD97 284 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 ALKAL2Q6UX46 152 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 STPG2Q8N412 459 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 ZNF614Q8N883 585 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 OR4K14Q8NGD5 310 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.58
NUP88-201ENST00000225696 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.58
NUP88-201ENST00000225696 RADILQ96JH8 1075 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 HDAC8Q9BY41 377 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 TSPAN10Q9H1Z9 355 aaPredicted RBP11.4□□□□□ -0.58
NUP88-201ENST00000225696 LIN7BQ9HAP6 207 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 C12orf4Q9NQ89 552 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 HAO2Q9NYQ3 351 aa11.4□□□□□ -0.58
NUP88-201ENST00000225696 A0A1B0GWA3 101 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 hCG_1807616A0A1W2PRN6 198 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 MFSD2BA6NFX1 497 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 LRRC72A6NJI9 287 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 IFITM5A6NNB3 132 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 MCIDASD6RGH6 385 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 STX11O75558 287 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 CT62P0C5K7 136 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 ADH7P40394 386 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.59
NUP88-201ENST00000225696 UBE2MP61081 183 aaKnown RBP11.4□□□□□ -0.59
NUP88-201ENST00000225696 PPP2CBP62714 309 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 PPP2CAP67775 309 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 HTRA3P83110 453 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 HTR4Q13639 388 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 EIPR1Q53HC9 387 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 FBXO42Q6P3S6 717 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 CDK20Q8IZL9 346 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 SNX33Q8WV41 574 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 SMARCD2Q92925 531 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 TOE1Q96GM8 510 aaKnown RBP11.4□□□□□ -0.59
NUP88-201ENST00000225696 C7orf50Q9BRJ6 194 aaKnown RBP11.4□□□□□ -0.59
NUP88-201ENST00000225696 ICAM5Q9UMF0 924 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 CA5BQ9Y2D0 317 aa11.4□□□□□ -0.59
NUP88-201ENST00000225696 A0A1B0GUH1 482 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 H3BSH0 61 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 CTSVO60911 334 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 ARL6IP5O75915 188 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 FCER2P06734 321 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 LPLP06858 475 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 DBIP07108 87 aaKnown RBP11.39□□□□□ -0.59
NUP88-201ENST00000225696 NMBP08949 121 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 CPMP14384 443 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 EMDP50402 254 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 SRSF5Q13243 272 aaKnown RBP11.39□□□□□ -0.59
NUP88-201ENST00000225696 GLDNQ6ZMI3 551 aaPredicted RBP11.39□□□□□ -0.59
NUP88-201ENST00000225696 C3P1Q6ZMU1 363 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 OVCH1Q7RTY7 1134 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 DNAAF1Q8NEP3 725 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 OR5T3Q8NGG3 340 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 OR6M1Q8NGM8 313 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 COQ8AQ8NI60 647 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 SUSD6Q92537 303 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms