RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 HMGN4O00479 90 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 UBDO15205 165 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 GYG2O15488 501 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 GSC2O15499 205 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 ADAM11O75078 769 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 RAD51DO75771 328 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 PMS2P2O95744 297 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 ALDOCP09972 364 aaKnown RBP13.23□□□□□ -0.29
UPK3A-201ENST00000216211 COX4I1P13073 169 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 S100A3P33764 101 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 IDUAP35475 653 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 ACVR1BP36896 505 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 UFM1P61960 85 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 KCNJ10P78508 379 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 HPCAP84074 193 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 KRTAP1-1Q07627 177 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 PDK3Q15120 406 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 SYPL1Q16563 259 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 DPY19L1Q2PZI1 675 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 TIMM23BQ5SRD1 257 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 OGFOD2Q6N063 350 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 GRINAQ7Z429 371 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 RNF130Q86XS8 419 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 ADGRG3Q86Y34 549 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 CCDC103Q8IW40 242 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 C10orf67Q8IYJ2 551 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 UBE2J2Q8N2K1 259 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 ANKFN1Q8N957 763 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 RP9Q8TA86 221 aaKnown RBP13.23□□□□□ -0.29
UPK3A-201ENST00000216211 OIT3Q8WWZ8 545 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 UTP4Q969X6 686 aaKnown RBP13.23□□□□□ -0.29
UPK3A-201ENST00000216211 ZHX1-C8orf76Q96EF9 292 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 CADM1Q9BY67 442 aaKnown RBP13.23□□□□□ -0.29
UPK3A-201ENST00000216211 CISD1Q9NZ45 108 aaKnown RBP13.23□□□□□ -0.29
UPK3A-201ENST00000216211 BTNL2Q9UIR0 455 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 CUBNO60494 3623 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 OR5H1A6NKK0 313 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 AP3D1O14617 1153 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 ABCD4O14678 606 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 NDUFS7O75251 213 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 PGM3O95394 542 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 CD8AP01732 235 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 IGHV4-39P01824 125 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 PTNP21246 168 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 IL12AP29459 219 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 NTF4P34130 210 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 CDKN2CP42773 168 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 IDH2P48735 452 aaKnown RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 MRPL19P49406 292 aaKnown RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 CDH11P55287 796 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 OR2B6P58173 313 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 ELF3P78545 371 aaPredicted RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 ETFDHQ16134 617 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 DNAL1Q4LDG9 190 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 FBXW9Q5XUX1 488 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 AP1ARQ63HQ0 302 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 DNAJC14Q6Y2X3 702 aaPredicted RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 SPATA19Q7Z5L4 167 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 PIGXQ8TBF5 258 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 CNOT9Q92600 299 aaKnown RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 APH1AQ96BI3 265 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 CCDC115Q96NT0 180 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 TRAF4Q9BUZ4 470 aaPredicted RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 SLCO5A1Q9H2Y9 848 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 MMADHCQ9H3L0 296 aaPredicted RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 ALG2Q9H553 416 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 EXOSC3Q9NQT5 275 aaKnown RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 GDF2Q9UK05 429 aaPredicted RBP13.22□□□□□ -0.29
UPK3A-201ENST00000216211 HDGFL3Q9Y3E1 203 aa13.22□□□□□ -0.29
UPK3A-201ENST00000216211 TMED7-TICAM2A0A0A6YYA0 188 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 A0A1W2PR80 420 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 CIB4A0PJX0 185 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 TMEM72A0PK05 275 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 CHRM4P08173 479 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 FOXG1P55316 489 aaPredicted RBP13.21□□□□□ -0.29
UPK3A-201ENST00000216211 GSTA3Q16772 222 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 P2RY8Q86VZ1 359 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
UPK3A-201ENST00000216211 POU5F2Q8N7G0 328 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 RBM15BQ8NDT2 890 aaKnown RBP13.21□□□□□ -0.29
UPK3A-201ENST00000216211 OR52N5Q8NH56 324 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 PANX1Q96RD7 426 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 MDFIQ99750 246 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 INPP5KQ9BT40 448 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 REG4Q9BYZ8 158 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 SLC38A1Q9H2H9 487 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 AIG1Q9NVV5 245 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 TMED7Q9Y3B3 224 aa13.21□□□□□ -0.29
UPK3A-201ENST00000216211 PLCE1Q9P212 2302 aa13.21□□□□□ -0.3
UPK3A-201ENST00000216211 LOC100653049A0A140TA62 436 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 CCDC154A6NI56 674 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 GPR171O14626 319 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 DNPH1O43598 174 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 MGRN1O60291 552 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 MRPL33O75394 65 aaKnown RBP13.2□□□□□ -0.3
UPK3A-201ENST00000216211 KRT34O76011 436 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 GSNP06396 782 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 THBS1P07996 1170 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 IMPDH2P12268 514 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 FKBP2P26885 142 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms