RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Zdhhc18Q5Y5T2 380 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tgfbr2Q62312 592 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Pik3cbQ8BTI9 1064 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Piwil2Q8CDG1 971 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Pramef8Q8CE24 480 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Nupl2Q8CIC2 420 aaKnown RBP6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tmprss3Q8K1T0 453 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr165Q8VFA2 313 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr815Q8VFU0 316 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr599Q8VG01 315 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 GmfbQ9CQI3 142 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tex33Q9D9J2 266 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tysnd1Q9DBA6 568 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tmem43Q9DBS1 400 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Lgi1Q9JIA1 557 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Sorcs1Q9JLC4 1167 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Slc39a1Q9QZ03 324 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Nme4Q9WV84 186 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Keap1Q9Z2X8 624 aaKnown RBP6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Akap6E9Q9K8 2307 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Heatr1G3X9B1 2143 aaKnown RBP6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 KantrA0A1W2P7I0 76 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Dlgap4B1AZP2 992 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr31E9Q3K2 317 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Slc16a7O70451 484 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 En1P09065 401 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 PpiaP17742 164 aaKnown RBP6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Stard6P59096 233 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tspan5P62080 268 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tuba1cP68373 449 aaKnown RBP6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tex52Q3TTI8 308 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Nt5c3bQ3UFY7 300 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Mccc2Q3ULD5 563 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Pla2g7Q60963 440 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Sox17Q61473 419 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 ShhQ62226 437 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Dcaf13Q6PAC3 445 aaKnown RBP6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tas2r136Q7TQA8 305 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vgll4Q80V24 287 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Cldn34b3Q80ZS5 209 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Wdr92Q8BGF3 357 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Galnt12Q8BGT9 576 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rab39aQ8BHD0 217 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm10330Q8BKS1 112 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ncs1Q8BNY6 190 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rdh12Q8BYK4 316 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Clec2hQ8C1T8 218 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Pars2Q8CFI5 475 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Etfrf1Q91V16 86 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ufsp2Q99K23 461 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gstt3Q99L20 241 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Desi1Q9CQT7 168 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Dnase1l2Q9D1G0 278 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Chp2Q9D869 196 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Yipf5Q9EQQ2 257 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 RbpmsQ9WVB0 197 aaKnown RBP6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Bahcc1Q3UHR0 2643 aa6.37□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Iglc4A0A0G2JEK5 104 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr601A2RS33 314 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Glb1l3A2RSQ1 649 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 GlsD3Z7P3 674 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Maml2F6U238 1170 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tmem200cJ3QK46 637 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 LatO54957 242 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Prss39O70169 367 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Fabp3P11404 133 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rab2bP59279 216 aaKnown RBP6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tle3Q08122 772 aaKnown RBP6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Treml2Q2LA85 329 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rnft2Q3UF64 445 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Il12rb1Q60837 738 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Il17aQ62386 158 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tlr12Q6QNU9 906 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Fpr-rs7Q71MR7 338 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Hes7Q8BKT2 225 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr229Q8VFN5 307 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr340Q8VGL0 312 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ddit4lQ8VHZ5 193 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Bhlhe41Q99PV5 410 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Acbd7Q9D258 88 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Bcas2Q9D287 225 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Plxdc2Q9DC11 530 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 PaplnQ9EPX2 1280 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Fstl3Q9EQC7 256 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gpr45Q9EQQ4 373 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Hapln2Q9ESM3 341 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Raet1dQ9JI58 249 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gdf2Q9WV56 428 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 2410004P03RikA0A087WQY2 205 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vmn2r49D3Z6L3 852 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ap1arE9PYF7 298 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr608E9Q564 316 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Dbx2F8VQH7 377 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vmn2r32K7N686 852 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 C3ar1O09047 477 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vmn2r42O35192 852 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Pcsk4P29121 655 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ptx3P48759 381 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 UbqlnlQ14DL0 610 aa6.36□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr681Q3SXH8 315 aa6.36□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 84.7 ms