RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Zfp59P16373 634 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Map2k4P47809 397 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 4930480E11RikQ0VG34 394 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Klhl21Q3U410 597 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Pla2g7Q60963 440 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 HepacamQ640R3 418 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Oscp1Q8BHW2 379 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 GatcQ8CBY0 155 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Papd4Q91YI6 484 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Pfdn1Q9CWM4 122 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Cmss1Q9CZT6 276 aaKnown RBP17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Dmac2Q9D7K5 258 aaKnown RBP17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Tmem38bQ9DAV9 292 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Thsd1Q9JM61 851 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Gm13078A2AGW8 474 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Gm13178B1AVU7 408 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Olfr172E9Q8F6 309 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Alx3O70137 343 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Ppp1caP62137 330 aaKnown RBP17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Serpina3mQ03734 418 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Uap1l1Q3TW96 507 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 1700012B07RikQ3V0S8 276 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Fut10Q5F2L2 481 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Atg4dQ8BGV9 474 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Dusp28Q8BTR5 163 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 PiguQ8K358 434 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Tsen15Q8R3W5 168 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Slc22a6Q8VC69 545 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Clec2dQ91V08 207 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 LipfQ9CPP7 395 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 4933436I01RikQ9D3T1 429 aa17■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Dchs2A0A0A6YW72 3346 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Rpl7a-ps5A0A140T8L3 268 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Olfr655E9Q252 308 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 RrhO35214 337 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Papss2O88428 621 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Entpd6Q3U0P5 455 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Ankrd53Q3V0J4 497 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Gm11541Q8C4D8 108 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Ston1Q8CDJ8 730 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Mrpl38Q8K2M0 380 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Tor3aQ9ER38 385 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Wdr61Q9ERF3 305 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Plce1Q8K4S1 2282 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Dcst2A0A140LIJ0 701 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Tas2r122D3YU55 309 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Slc16a5G5E8K6 468 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Nkx2-6P43688 289 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 RykQ01887 594 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Grxcr1Q50H32 290 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Ttf1Q62187 859 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 IppkQ6P1C1 489 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Lkaaear1Q8BIG2 198 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Klhl12Q8BZM0 568 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Slc1a7Q8JZR4 559 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Olfr1043Q8VFK4 314 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Wdr45Q91VM3 360 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Dnaja4Q9JMC3 397 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Orc5Q9WUV0 435 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Scn2aA0A0J9YTW6 2006 aa16.99■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Tyrp1P07147 537 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Tcea1P10711 301 aaKnown RBP16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Fcer1aP20489 250 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 SnrpbP27048 231 aaKnown RBP16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Acp5Q05117 327 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Mfsd12Q3U481 476 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Zfp791Q497V9 528 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Trp53i11Q4QQM4 189 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Znf488Q5HZG9 337 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Fzd8Q61091 685 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Clcn4Q61418 747 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Arhgef4Q7TNR9 484 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Lats1Q8BYR2 1129 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Emc1Q8C7X2 997 aaKnown RBP16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Tma7Q8K003 64 aaKnown RBP16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Pafah2Q8VDG7 390 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 GhitmQ91VC9 346 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Gm10762Q9CZN6 115 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Mfsd2aQ9DA75 534 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Prl8a1Q9DAV8 240 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Herpud2Q9JJC9 404 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Rasal1Q9Z268 799 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Ms4a7E9Q9V5 267 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Dll3O88516 592 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 IapP24822 559 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Actr1aP61164 376 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Rps15aP62245 130 aaKnown RBP16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Fabp5Q05816 135 aaKnown RBP16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Pydc3Q3V3Q4 588 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 CalcrQ60755 533 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Coq8aQ60936 645 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 DgkzQ80UP3 929 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Nyap2Q8BM65 682 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Cldn17Q8BXA6 224 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Actr1bQ8R5C5 376 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Rhbdl1Q8VC82 373 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Olfr164Q8VF87 315 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Olfr98Q8VFD9 309 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Slc41a3Q921R8 488 aa16.98■□□□□ 0.31
Ccdc3-201ENSMUST00000027988 Slc25a36Q922G0 311 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms