RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 KRCC1Q9NPI7 259 aaPredicted RBP10.82□□□□□ -0.68
ERGIC3-220ENST00000640748 NDUFA13Q9P0J0 144 aa10.82□□□□□ -0.68
ERGIC3-220ENST00000640748 ITGB1BP2Q9UKP3 347 aa10.82□□□□□ -0.68
ERGIC3-220ENST00000640748 SERINC4A6NH21 518 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 TRIM64CA6NLI5 447 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 ZAR1LA6NP61 321 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 SLC1A7O00341 560 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 TO15178 435 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 TFAP2AP05549 437 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CCDC159P0C7I6 412 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 GKN3PP0CG01 181 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CD46P15529 392 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CRHBPP24387 322 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 EEF1B2P24534 225 aaKnown RBP10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 EPHA2P29317 976 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CDH15P55291 814 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 SLC26A5P58743 744 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CDC42P60953 191 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CXCR4P61073 352 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 ZNF613Q6PF04 617 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 C3P1Q6ZMU1 363 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 ZER1Q7Z7L7 766 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 C9orf40Q8IXQ3 194 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 ZNF440Q8IYI8 595 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 TMEM178AQ8NBL3 297 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 FAM81AQ8TBF8 368 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CNOT9Q92600 299 aaKnown RBP10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 HSPBAP1Q96EW2 488 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 LPAR4Q99677 370 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 SPOCK3Q9BQ16 436 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 TRIM2Q9C040 744 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 WWTR1Q9GZV5 400 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 ENKD1Q9H0I2 346 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 CDCP1Q9H5V8 836 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 UBQLN4Q9NRR5 601 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 DNAJB12Q9NXW2 375 aaKnown RBP10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 SCN3BQ9NY72 215 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 REV1Q9UBZ9 1251 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 SLC7A7Q9UM01 511 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 SLC35A3Q9Y2D2 325 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 TPRKBQ9Y3C4 175 aa10.81□□□□□ -0.68
ERGIC3-220ENST00000640748 MED13LQ71F56 2210 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 EXPH5Q8NEV8 1989 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 E9PLN8 166 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 SCDO00767 359 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 NME2P1O60361 137 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 REM1O75628 298 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 SLC25A12O75746 678 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 UTS2O95399 124 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 CSTAP01040 98 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 THY1P04216 161 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 PRG2P13727 222 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 HPGDP15428 266 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 NME2P22392 152 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 CHMP24386 653 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 POU1F1P28069 291 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 HTR2AP28223 471 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 IL12BP29460 328 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 ADH7P40394 386 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 RNF144AP50876 292 aaPredicted RBP10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 NR0B1P51843 470 aaKnown RBP10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 CSNK2BP67870 215 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 OC90Q02509 493 aaPredicted RBP10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 TEKQ02763 1124 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 GTF3C1Q12789 2109 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 TSPAN31Q12999 210 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 PTGES3Q15185 160 aaKnown RBP10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 LAIR2Q6ISS4 152 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 SLC25A25Q6KCM7 469 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 ZNF773Q6PK81 442 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 SPNS3Q6ZMD2 512 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 MBOAT2Q6ZWT7 520 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 RPS19BP1Q86WX3 136 aaKnown RBP10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 NKAIN4Q8IVV8 208 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 ENTHD1Q8IYW4 607 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 RNF113BQ8IZP6 322 aaKnown RBP10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 GHDCQ8N2G8 530 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 C17orf47Q8NEP4 570 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 B3GNT7Q8NFL0 401 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 BPIFB6Q8NFQ5 453 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 TP53INP1Q96A56 240 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 EFHD2Q96C19 240 aaPredicted RBP10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 VKORC1Q9BQB6 163 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 IMPAD1Q9NX62 359 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 LRFN1Q9P244 771 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 RNF6Q9Y252 685 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 HRH3Q9Y5N1 445 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
ERGIC3-220ENST00000640748 SMIM31A0A1B0GVY4 71 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 H3BN98 237 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 MPZL2O60487 215 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 TSPAN2O60636 221 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 FAM20BO75063 409 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 BCAS1O75363 584 aaPredicted RBP10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 LINGO3P0C6S8 592 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 ABOP16442 354 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 ZNF24P17028 368 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 TBXA2RP21731 343 aa10.79□□□□□ -0.68
ERGIC3-220ENST00000640748 FMO3P31513 532 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms