RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	MAGEA3	P43357	314 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	HTR5A	P47898	357 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ARL13A	Q5H913	290 aa	Predicted RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	LIPK	Q5VXJ0	399 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	DHRS7B	Q6IAN0	325 aa	Predicted RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ADAM5	Q6NVV9	412 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	FIGNL1	Q6PIW4	674 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	B3GNT8	Q7Z7M8	397 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	SERPINA9	Q86WD7	417 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	C1orf210	Q8IVY1	113 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZBED6CL	Q96FA7	236 aa	Predicted RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ITCH	Q96J02	903 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	C4orf36	Q96KX1	117 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	FCRL1	Q96LA6	429 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	KCTD15	Q96SI1	283 aa	Predicted RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	NDUFAF3	Q9BU61	184 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	FSD1L	Q9BXM9	530 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	BARHL1	Q9BZE3	327 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	IL22	Q9GZX6	179 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ARV1	Q9H2C2	271 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ATXN3L	Q9H3M9	355 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	METTL17	Q9H7H0	456 aa	Predicted RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	TRIM36	Q9NQ86	728 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	CRLS1	Q9UJA2	301 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PSG11	Q9UQ72	335 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	CRYBG1	Q9Y4K1	1723 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	CNTNAP4	Q9C0A0	1308 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072		A0A1W2PRU2	124 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	TCRBV7S3A2	A0A539	114 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ANKRD66	B4E2M5	251 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	MCIDAS	D6RGH6	385 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	NME4	O00746	187 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	CHAD	O15335	359 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF264	O43296	627 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PROSC	O94903	275 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	IFNA17	P01571	189 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	SNRPC	P09234	159 aa	Known RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	B4GALT1	P15291	398 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	HLA-G	P17693	338 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	TPSB2	P20231	275 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	GABRR1	P24046	479 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	CDKN1A	P38936	164 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	FAM3A	P98173	230 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	FMO1	Q01740	532 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ENPP2	Q13822	863 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	TPSAB1	Q15661	275 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	GUCA2B	Q16661	112 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PROX2	Q3B8N5	592 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF789	Q5FWF6	425 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PYY3	Q5JQD4	70 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	AKR1C8P	Q5T2L2	129 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PRAMEF7	Q5VXH5	474 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	ESRP1	Q6NXG1	681 aa	Known RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	MED27	Q6P2C8	311 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	RNASEK	Q6P5S7	137 aa	Known RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	B3GLCT	Q6Y288	498 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	SLC16A9	Q7RTY1	509 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	GLB1L2	Q8IW92	636 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	C17orf78	Q8N4C9	275 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	DUSP18	Q8NEJ0	188 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR51A7	Q8NH64	312 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	KCNG3	Q8TAE7	436 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PIGX	Q8TBF5	258 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	LRRC15	Q8TF66	581 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	CPB2	Q96IY4	423 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR2M2	Q96R28	347 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	DDO	Q99489	341 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	AMBRA1	Q9C0C7	1298 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PTGES2	Q9H7Z7	377 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	BEX1	Q9HBH7	125 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	SLC6A20	Q9NP91	592 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	MBNL1	Q9NR56	388 aa	Known RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	SMPD4	Q9NXE4	827 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	COMMD3	Q9UBI1	195 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	FKBPL	Q9UIM3	349 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	NRK	Q7Z2Y5	1582 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	A2ML1	A8K2U0	1454 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	SEC14L6	B5MCN3	397 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PPP6C	O00743	305 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	TP53I11	O14683	189 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	B4GALT5	O43286	388 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	FARS2	O95363	451 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ANXA2	P07355	339 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	RAP2A	P10114	183 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PSMA1	P25786	263 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PSMB5	P28074	263 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	SOAT1	P35610	550 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	SNU13	P55769	128 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	NDUFA6	P56556	154 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	RAP1A	P62834	184 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	RBM39	Q14498	530 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF79	Q15937	498 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	SMN1	Q16637	294 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PPM1J	Q5JR12	505 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	NOL9	Q5SY16	702 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	DAW1	Q8N136	415 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR2G2	Q8NGZ5	317 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	GNPDA2	Q8TDQ7	276 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	TNFAIP8L1	Q8WVP5	186 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	UCN3	Q969E3	161 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms