RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 OR10A5Q9H207 317 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 TAS2R8Q9NYW2 309 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 FBXO9Q9UK97 447 aaPredicted RBP13.38□□□□□ -0.27
SCARB2-216ENST00000639300 RAB3DO95716 219 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 FPR3P25089 353 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 TACR3P29371 465 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ETV5P41161 510 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ETV1P50549 477 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 LIM2P55344 173 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ACY1Q03154 408 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 VASNQ6EMK4 673 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 UEVLDQ8IX04 471 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 CADM3Q8N126 398 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ELP5Q8TE02 316 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 SDF2Q99470 211 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 NUDT22Q9BRQ3 303 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ALG12Q9BV10 488 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ELOVL3Q9HB03 270 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 SUSD2Q9UGT4 822 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 TRIOBPQ9H2D6 2365 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ZC3H12DA2A288 527 aaKnown RBP13.38□□□□□ -0.27
SCARB2-216ENST00000639300 MEGF11A6BM72 1044 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 SERINC4A6NH21 518 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 FZD7O75084 574 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 CRABP1P29762 137 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 CASP3P42574 277 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ACTBP60709 375 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 HERV-K104P61576 105 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ACTG1P63261 375 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 FAM205BPQ63HN1 556 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 TMEM215Q68D42 235 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 CFAP77Q6ZQR2 320 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF595Q8IYB9 648 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 TM9SF4Q92544 642 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
SCARB2-216ENST00000639300 SIRT5Q9NXA8 310 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 TAS2R3Q9NYW6 316 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 ASB4Q9Y574 426 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 SPTBN2O15020 2390 aa13.38□□□□□ -0.27
SCARB2-216ENST00000639300 LAMTOR5O43504 91 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 DOK2O60496 412 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 TFP02787 698 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ERCC1P07992 297 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 LSSP48449 732 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SIRPAP78324 504 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 KIAA0895LQ68EN5 471 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 STX12Q86Y82 276 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF565Q8N9K5 539 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 OR7G2Q8NG99 324 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ABHD4Q8TB40 342 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 MED17Q9NVC6 651 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 COQ3Q9NZJ6 369 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 MLXQ9UH92 298 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 TMEFF2Q9UIK5 374 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SLC2A10O95528 541 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 PTGS2P35354 604 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SNRPGP62308 76 aaKnown RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SPOCK1Q08629 439 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 MFSD13AQ14CX5 517 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 AGAP7PQ5VUJ5 663 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 LILRA6Q6PI73 481 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 MED25Q71SY5 747 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 IL22RA1Q8N6P7 574 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 CLDN22Q8N7P3 220 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 OR4C15Q8NGM1 316 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 PFN4Q8NHR9 129 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ASB12Q8WXK4 309 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SENP5Q96HI0 755 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 MYADMQ96S97 322 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 HINT3Q9NQE9 182 aaKnown RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ICKQ9UPZ9 632 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 NEU3Q9UQ49 428 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ZAR1LA6NP61 321 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SLC22A5O76082 557 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 TMEM225BP0DP42 221 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 HTR1FP30939 366 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 PPP2CBP62714 309 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 PPP2CAP67775 309 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 POU3F1Q03052 451 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 PDSS1Q5T2R2 415 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 AWAT2Q6E213 333 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SPAG16Q8N0X2 631 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SNAPC3Q92966 411 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 CNRIP1Q96F85 164 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 Q96M85 177 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 C11orf54Q9H0W9 315 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 FKBP14Q9NWM8 211 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 NCDNQ9UBB6 729 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 MBD1Q9UIS9 605 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-216ENST00000639300 OSGIN1Q9UJX0 560 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ACOT7O00154 380 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 APOC3P02656 99 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SYPP08247 313 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 GRK5P34947 590 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 HOXD12P35452 270 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 EIF2DP41214 584 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms