RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 JUNBP17275 347 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-213ENST00000638680 ARSJQ5FYB0 599 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-213ENST00000638680 SYT6Q5T7P8 510 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-213ENST00000638680 UNQ6126/PRO20091Q6UXV3 157 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 FUNDC1Q8IVP5 155 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 ZFAND1Q8TCF1 268 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 OR10A5Q9H207 317 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 OR10A2Q9H208 303 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 SIAEQ9HAT2 523 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 NRIP3Q9NQ35 241 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 QPCTLQ9NXS2 382 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 PLEK2Q9NYT0 353 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 DPM1O60762 260 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 MT-CO2P00403 227 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 CTSAP10619 480 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 AFF3P51826 1226 aaKnown RBP17.25■□□□□ 0.35
SCARB2-213ENST00000638680 SEC61A1P61619 476 aaKnown RBP17.25■□□□□ 0.35
SCARB2-213ENST00000638680 EXOSC6Q5RKV6 272 aaKnown RBP17.25■□□□□ 0.35
SCARB2-213ENST00000638680 NIPAL3Q6P499 406 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 IDO2Q6ZQW0 420 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 MRPL21Q7Z2W9 205 aaKnown RBP17.25■□□□□ 0.35
SCARB2-213ENST00000638680 C3orf49Q96BT1 292 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 LUZP4Q9P127 313 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 CCDC163A0A0D9SF12 145 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 OR2A25A4D2G3 310 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 MTNR1BP49286 362 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 COX20Q5RI15 118 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 TAS1R1Q7RTX1 841 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 OR52I1Q8NGK6 324 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 GHSRQ92847 366 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 MIB2Q96AX9 1013 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 ADOQ96SZ5 270 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 RLIMQ9NVW2 624 aa17.25■□□□□ 0.35
SCARB2-213ENST00000638680 A8MXE2 369 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 VASPP50552 380 aaPredicted RBP17.24■□□□□ 0.35
SCARB2-213ENST00000638680 CLDN2P57739 230 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 FAPQ12884 760 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 OR10K1Q8NGX5 313 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SEMA4GQ9NTN9 838 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 MYH1P12882 1939 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 DNAJC25-GNG10A0A024R161 153 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SLC9B1P1A6NJY1 282 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SHOXO15266 292 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 TCRBP04435 133 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 IL32P24001 234 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 OTX2P32243 289 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 KCNJ10P78508 379 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 ACY1Q03154 408 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 PAQR9Q6ZVX9 377 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SIAH3Q8IW03 269 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 ABHD4Q8TB40 342 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SLC35B4Q969S0 331 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 KRBOX1C9JBD0 128 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 MAOBP27338 520 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 XCR1P46094 333 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 VEGFCP49767 419 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 ILKQ13418 452 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 MARCH8Q5T0T0 291 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 CPXM2Q8N436 756 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 ZNF454Q8N9F8 522 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SLC25A31Q9H0C2 315 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SLC22A23A1A5C7 686 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 STK17BO94768 372 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 OPN1LWP04000 364 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 DBHP09172 617 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 IRF2P14316 349 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 CNN3Q15417 329 aaKnown RBP17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SMAD2Q15796 467 aaKnown RBP17.24■□□□□ 0.35
SCARB2-213ENST00000638680 HTR3DQ70Z44 454 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 WDSUB1Q8N9V3 476 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 TM9SF4Q92544 642 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SEC22AQ96IW7 307 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 NMNAT2Q9BZQ4 307 aa17.24■□□□□ 0.35
SCARB2-213ENST00000638680 SULT2B1O00204 365 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 GPRIN2O60269 458 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 ELAVL4P26378 380 aaKnown RBP17.23■□□□□ 0.35
SCARB2-213ENST00000638680 RAB31Q13636 194 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 ASB17Q8WXJ9 295 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 TPSD1Q9BZJ3 242 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 EFCAB7A8K855 629 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 SF3B4Q15427 424 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCARB2-213ENST00000638680 UBTD2Q8WUN7 234 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 TXNDC15Q96J42 360 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 TIAM2Q8IVF5 1701 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 H0YIV9 168 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 CCR6P51684 374 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 ERVK-16P61578 105 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 TEX37Q96LM6 180 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 CHRDQ9H2X0 955 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 GCM1Q9NP62 436 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 CPNE7Q9UBL6 633 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 SIRPAP78324 504 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 MBOAT2Q6ZWT7 520 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 ZNF765Q7L2R6 523 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 SNX18Q96RF0 628 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 WASH6PQ9NQA3 447 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 SERTAD4Q9NUC0 356 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 SLC6A14Q9UN76 642 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 NME7Q9Y5B8 376 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 HSBP1L1C9JCN9 74 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms