RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FOXK2Q01167 660 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 NAE1Q13564 534 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TDGQ13569 410 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ALKBH1Q13686 389 aaKnown RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TOMM20Q15388 145 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 DUSP28Q4G0W2 176 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ACSM3Q53FZ2 586 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ARL9Q6T311 187 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 DRAM2Q6UX65 266 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ESPNLQ6ZVH7 1005 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 C1QL4Q86Z23 238 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 SCN4BQ8IWT1 228 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 LNX2Q8N448 690 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 SIRT6Q8N6T7 355 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 SDR9C7Q8NEX9 313 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 OR4A4PQ8NGN8 299 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 OR6N1Q8NGY5 312 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 RAB3CQ96E17 227 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 SUSD3Q96L08 255 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 SPON2Q9BUD6 331 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ADAM19Q9H013 955 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 KLHL31Q9H511 634 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 SEC61A2Q9H9S3 476 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ZFYVE1Q9HBF4 777 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 IL26Q9NPH9 171 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TP53TG5Q9Y2B4 290 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 H3BNC9 293 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ADH1CP00326 375 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 RAB40ALP0C0E4 278 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 PRG2P13727 222 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 PAX1P15863 534 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF14P17017 642 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 NDUFB7P17568 137 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 XPAP23025 273 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 PTH2RP49190 550 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 NAAAQ02083 359 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 PIN1Q13526 163 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF792Q3KQV3 632 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 VWA2Q5GFL6 755 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 DMKNQ6E0U4 476 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 THOC6Q86W42 341 aaKnown RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 RBM45Q8IUH3 476 aaKnown RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TNFAIP8L1Q8WVP5 186 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 DNAJB3Q8WWF6 145 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 C14orf79Q96F83 325 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM19Q96HH6 336 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF75AQ96N20 296 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 NDC1Q9BTX1 674 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TRMT61BQ9BVS5 477 aaKnown RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF471Q9BX82 626 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 PINK1Q9BXM7 581 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 KATNBL1Q9H079 304 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TSPAN10Q9H1Z9 355 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 SEMA4GQ9NTN9 838 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 CLEC4AQ9UMR7 237 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 IGLV3-16A0A075B6K0 115 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 GGT3PA6NGU5 568 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 F2P00734 622 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 RHOCP08134 193 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 C1GALT1C1LP0DN25 315 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
CAPN3-221ENST00000638141 RAB4AP20338 218 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 SOAT1P35610 550 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 ATP6V1E1P36543 226 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 SLC11A2P49281 568 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 P2RX1P51575 399 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 OC90Q02509 493 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-221ENST00000638141 MTFR2Q6P444 385 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 SLC29A4Q7RTT9 530 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 OR6J1Q8NGC5 347 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 FCRL4Q96PJ5 515 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 OR51I1Q9H343 314 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM27Q9HBJ8 222 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 MYOZ1Q9NP98 299 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-221ENST00000638141 H2AFY2Q9P0M6 372 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-221ENST00000638141 CACNG4Q9UBN1 327 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 LHX3Q9UBR4 397 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 CASTOR2A6NHX0 329 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 F8VVB4 439 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 F8VWA3 439 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 SYT5O00445 386 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 EMC8O43402 210 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 CD1AP06126 327 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 BCHEP06276 602 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 UCHL1P09936 223 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 GJA1P17302 382 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 NT5EP21589 574 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 AKR1C2P52895 323 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 PTSQ03393 145 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 AKR1C1Q04828 323 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 PRKCZQ05513 592 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 CNTN1Q12860 1018 aa11.1□□□□□ -0.63
CAPN3-221ENST00000638141 PGGHGQ32M88 737 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms